Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 USP36-210ENST00000588086 3187 ntAPPRIS ALT2 TSL 1 (best)16.08■□□□□ 0.166e-7■■■□□ 15
MATR3P43243 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.16e-7■■■□□ 15
MATR3P43243 USP36-204ENST00000586066 960 ntTSL 57.97□□□□□ -1.136e-7■■■□□ 15
MATR3P43243 MSI2-207ENST00000579205 500 ntTSL 416.26■□□□□ 0.192e-6■■■□□ 15
MATR3P43243 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.099e-7■■■□□ 15
MATR3P43243 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC15.53■□□□□ 0.089e-7■■■□□ 15
MATR3P43243 ADGRG6-214ENST00000545477 657 ntTSL 512.46□□□□□ -0.419e-7■■■□□ 15
MATR3P43243 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.599e-7■■■□□ 15
MATR3P43243 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC10.61□□□□□ -0.719e-7■■■□□ 15
MATR3P43243 KTN1-221ENST00000555498 595 ntAPPRIS ALT2 TSL 321.84■■□□□ 1.091e-6■■■□□ 15
MATR3P43243 NARS2-207ENST00000529880 755 ntTSL 313.35□□□□□ -0.278e-7■■■□□ 15
MATR3P43243 KTN1-225ENST00000557267 291 ntTSL 33.49□□□□□ -1.851e-6■■■□□ 15
MATR3P43243 SCFD1-224ENST00000557713 556 ntTSL 417.36■□□□□ 0.379e-7■■■□□ 15
MATR3P43243 SCFD1-223ENST00000557076 743 ntTSL 34.96□□□□□ -1.629e-7■■■□□ 15
MATR3P43243 SCFD1-210ENST00000553693 490 ntTSL 33.29□□□□□ -1.889e-7■■■□□ 15
MATR3P43243 SEPT9-219ENST00000588575 559 ntTSL 422.32■■□□□ 1.162e-6■■■□□ 15
MATR3P43243 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.232e-6■■■□□ 15
MATR3P43243 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.162e-6■■■□□ 15
MATR3P43243 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.38■□□□□ 0.053e-9■■■□□ 15
MATR3P43243 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 03e-9■■■□□ 15
MATR3P43243 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.97■□□□□ 0.152e-6■■■□□ 15
MATR3P43243 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.5■■□□□ 1.511e-6■■■□□ 15
MATR3P43243 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.11e-6■■■□□ 15
MATR3P43243 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.54■■□□□ 1.041e-6■■■□□ 15
MATR3P43243 METTL21A-211ENST00000461419 559 ntTSL 521.27■■□□□ 11e-6■■■□□ 15
MATR3P43243 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.19■□□□□ 0.981e-6■■■□□ 15
MATR3P43243 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.11■□□□□ 0.971e-6■■■□□ 15
MATR3P43243 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.851e-6■■■□□ 15
MATR3P43243 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.761e-6■■■□□ 15
MATR3P43243 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.71e-6■■■□□ 15
MATR3P43243 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.391e-6■■■□□ 15
MATR3P43243 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.06■□□□□ 0.321e-6■■■□□ 15
MATR3P43243 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.512e-6■■■□□ 15
MATR3P43243 LRP5-206ENST00000529993 5103 ntTSL 1 (best)17.1■□□□□ 0.332e-6■■■□□ 15
MATR3P43243 ZFAND3-204ENST00000440482 821 ntTSL 313.43□□□□□ -0.262e-6■■■□□ 15
MATR3P43243 MSI2-210ENST00000579505 577 ntTSL 319.61■□□□□ 0.732e-6■■■□□ 15
MATR3P43243 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.352e-6■■■□□ 14.9
MATR3P43243 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.35■□□□□ 0.532e-6■■■□□ 14.9
MATR3P43243 EEFSEC-204ENST00000484438 640 ntTSL 317.52■□□□□ 0.42e-6■■■□□ 14.9
MATR3P43243 PAWR-205ENST00000548075 592 ntTSL 48.52□□□□□ -1.054e-7■■■□□ 14.9
MATR3P43243 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC15.13■□□□□ 0.013e-6■■■□□ 14.9
MATR3P43243 RPS6KA2-207ENST00000506565 587 ntTSL 414□□□□□ -0.173e-6■■■□□ 14.9
MATR3P43243 RPS6KA2-206ENST00000503859 4137 ntTSL 2 BASIC12.69□□□□□ -0.383e-6■■■□□ 14.9
MATR3P43243 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.952e-6■■■□□ 14.9
MATR3P43243 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.241e-6■■■□□ 14.9
MATR3P43243 EIF3E-215ENST00000522445 841 ntTSL 36.32□□□□□ -1.43e-8■■■□□ 14.9
MATR3P43243 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.86□□□□□ -1.473e-8■■■□□ 14.9
MATR3P43243 EIF3E-209ENST00000519627 697 ntTSL 24.74□□□□□ -1.653e-8■■■□□ 14.9
MATR3P43243 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.673e-8■■■□□ 14.9
MATR3P43243 EIF3E-214ENST00000522352 611 ntTSL 34.36□□□□□ -1.713e-8■■■□□ 14.9
MATR3P43243 EIF3E-208ENST00000519517 726 ntTSL 33.24□□□□□ -1.893e-8■■■□□ 14.9
MATR3P43243 EIF3E-207ENST00000519413 419 ntTSL 32.93□□□□□ -1.943e-8■■■□□ 14.9
MATR3P43243 EIF3E-212ENST00000521614 1990 ntTSL 22.89□□□□□ -1.953e-8■■■□□ 14.9
MATR3P43243 CDC14B-207ENST00000463547 553 ntTSL 416.12■□□□□ 0.175e-7■■■□□ 14.9
MATR3P43243 CDC14B-205ENST00000415608 684 ntTSL 57.62□□□□□ -1.195e-7■■■□□ 14.9
MATR3P43243 CDC14B-213ENST00000496750 649 ntTSL 33.96□□□□□ -1.785e-7■■■□□ 14.9
MATR3P43243 CHPT1-210ENST00000552351 1524 ntTSL 229.47■■■□□ 2.312e-7■■■□□ 14.9
MATR3P43243 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.27■■■□□ 2.282e-7■■■□□ 14.9
MATR3P43243 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.27■■■□□ 2.282e-7■■■□□ 14.9
MATR3P43243 ZFP90-216ENST00000573685 543 ntTSL 429.27■■■□□ 2.282e-7■■■□□ 14.9
MATR3P43243 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.222e-7■■■□□ 14.9
MATR3P43243 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.22e-7■■■□□ 14.9
MATR3P43243 CHPT1-204ENST00000549128 1552 ntTSL 528.82■■■□□ 2.22e-7■■■□□ 14.9
MATR3P43243 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.51■■□□□ 1.832e-7■■■□□ 14.9
MATR3P43243 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.51■■□□□ 1.832e-7■■■□□ 14.9
MATR3P43243 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.832e-7■■■□□ 14.9
MATR3P43243 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.72e-7■■■□□ 14.9
MATR3P43243 MTMR3-212ENST00000495098 461 ntTSL 423.8■■□□□ 1.41e-10■■■□□ 14.9
MATR3P43243 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.352e-7■■■□□ 14.9
MATR3P43243 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.29■■□□□ 1.322e-7■■■□□ 14.9
MATR3P43243 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.97■□□□□ 0.952e-7■■■□□ 14.9
MATR3P43243 ILVBL-204ENST00000527093 1090 ntTSL 1 (best)20.87■□□□□ 0.932e-7■■■□□ 14.9
MATR3P43243 ILVBL-205ENST00000531635 947 ntTSL 320.79■□□□□ 0.922e-7■■■□□ 14.9
MATR3P43243 ZFP90-218ENST00000576805 648 ntTSL 320.76■□□□□ 0.912e-7■■■□□ 14.9
MATR3P43243 CHPT1-202ENST00000546490 476 ntTSL 220.47■□□□□ 0.872e-7■■■□□ 14.9
MATR3P43243 HS6ST1-204ENST00000494089 585 ntTSL 219.32■□□□□ 0.682e-7■■■□□ 14.9
MATR3P43243 ILVBL-207ENST00000533148 1309 ntTSL 519■□□□□ 0.632e-7■■■□□ 14.9
MATR3P43243 ILVBL-214ENST00000600984 709 ntTSL 318.77■□□□□ 0.62e-7■■■□□ 14.9
MATR3P43243 ZFP90-202ENST00000562156 485 ntTSL 418.72■□□□□ 0.592e-7■■■□□ 14.9
MATR3P43243 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.61■□□□□ 0.572e-7■■■□□ 14.9
MATR3P43243 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.512e-7■■■□□ 14.9
MATR3P43243 ZFP90-213ENST00000571809 650 ntTSL 418.25■□□□□ 0.512e-7■■■□□ 14.9
MATR3P43243 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.492e-7■■■□□ 14.9
MATR3P43243 CAPZB-207ENST00000459967 579 ntTSL 317.8■□□□□ 0.442e-7■■■□□ 14.9
MATR3P43243 ZFP90-208ENST00000569323 556 ntTSL 417.21■□□□□ 0.352e-7■■■□□ 14.9
MATR3P43243 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.32e-17■■■□□ 14.9
MATR3P43243 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.32e-7■■■□□ 14.9
MATR3P43243 CAPZB-208ENST00000482808 660 ntTSL 216.85■□□□□ 0.292e-7■■■□□ 14.9
MATR3P43243 MTMR3-207ENST00000445401 665 ntTSL 316.56■□□□□ 0.241e-10■■■□□ 14.9
MATR3P43243 HS6ST1-203ENST00000469019 559 ntTSL 416.48■□□□□ 0.232e-7■■■□□ 14.9
MATR3P43243 ILVBL-212ENST00000598709 747 ntTSL 516.45■□□□□ 0.222e-7■■■□□ 14.9
MATR3P43243 IRF2-203ENST00000504340 565 ntTSL 416.08■□□□□ 0.162e-7■■■□□ 14.9
MATR3P43243 IRF2-208ENST00000510814 568 ntTSL 415.71■□□□□ 0.112e-7■■■□□ 14.9
MATR3P43243 IRF2-207ENST00000509274 591 ntTSL 415.58■□□□□ 0.082e-7■■■□□ 14.9
MATR3P43243 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.082e-7■■■□□ 14.9
MATR3P43243 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 02e-7■■■□□ 14.9
MATR3P43243 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.021e-10■■■□□ 14.9
MATR3P43243 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.072e-7■■■□□ 14.9
MATR3P43243 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.55□□□□□ -0.082e-17■■■□□ 14.9
MATR3P43243 IRF2-205ENST00000506230 498 ntTSL 214.44□□□□□ -0.12e-7■■■□□ 14.9
Retrieved 100 of 16,209 protein–RNA pairs in 95.9 ms