Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN2P17655 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN2P17655 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CAPN2P17655 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CAPN2P17655 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN2P17655 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPN2P17655 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.72■□□□□ 0.91
CAPN2P17655 AC132008.2-207ENST00000454517 770 ntBASIC20.72■□□□□ 0.91
CAPN2P17655 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 AC055717.3-201ENST00000622967 595 ntBASIC20.72■□□□□ 0.91
CAPN2P17655 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CAPN2P17655 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.72■□□□□ 0.91
CAPN2P17655 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN2P17655 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CAPN2P17655 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN2P17655 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN2P17655 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN2P17655 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPN2P17655 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN2P17655 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN2P17655 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.71■□□□□ 0.91
CAPN2P17655 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 GPX1P2-201ENST00000429271 606 ntBASIC20.71■□□□□ 0.91
CAPN2P17655 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN2P17655 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.71■□□□□ 0.91
CAPN2P17655 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN2P17655 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CAPN2P17655 IGHV3-22-201ENST00000520721 359 ntBASIC20.71■□□□□ 0.91
CAPN2P17655 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.71■□□□□ 0.91
CAPN2P17655 AC040169.1-201ENST00000565382 521 ntBASIC20.71■□□□□ 0.91
CAPN2P17655 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN2P17655 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.71■□□□□ 0.91
CAPN2P17655 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.71■□□□□ 0.91
CAPN2P17655 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CAPN2P17655 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.71■□□□□ 0.91
CAPN2P17655 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN2P17655 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CAPN2P17655 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN2P17655 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CAPN2P17655 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CAPN2P17655 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CAPN2P17655 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN2P17655 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 AL138781.2-201ENST00000617896 1843 ntBASIC20.7■□□□□ 0.9
CAPN2P17655 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CAPN2P17655 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN2P17655 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CAPN2P17655 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN2P17655 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN2P17655 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN2P17655 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
CAPN2P17655 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN2P17655 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN2P17655 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN2P17655 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CAPN2P17655 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CAPN2P17655 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN2P17655 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN2P17655 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms