Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 HCG11-201ENST00000411553 5696 ntBASIC21.54■■□□□ 1.04
POLR3DP05423 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR3DP05423 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
POLR3DP05423 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
POLR3DP05423 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
POLR3DP05423 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
POLR3DP05423 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR3DP05423 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
POLR3DP05423 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR3DP05423 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.53■■□□□ 1.04
POLR3DP05423 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 AC004870.1-201ENST00000315132 882 ntBASIC21.53■■□□□ 1.04
POLR3DP05423 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
POLR3DP05423 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.53■■□□□ 1.04
POLR3DP05423 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.53■■□□□ 1.04
POLR3DP05423 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR3DP05423 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.53■■□□□ 1.04
POLR3DP05423 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
POLR3DP05423 AC018470.1-201ENST00000624790 3129 ntBASIC21.53■■□□□ 1.04
POLR3DP05423 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR3DP05423 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR3DP05423 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR3DP05423 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
POLR3DP05423 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
POLR3DP05423 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
POLR3DP05423 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
POLR3DP05423 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.52■■□□□ 1.04
POLR3DP05423 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR3DP05423 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR3DP05423 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
POLR3DP05423 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR3DP05423 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR3DP05423 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
POLR3DP05423 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR3DP05423 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR3DP05423 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR3DP05423 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
POLR3DP05423 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
POLR3DP05423 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
POLR3DP05423 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.51■■□□□ 1.03
POLR3DP05423 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.51■■□□□ 1.03
POLR3DP05423 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.51■■□□□ 1.03
POLR3DP05423 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.51■■□□□ 1.03
POLR3DP05423 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.51■■□□□ 1.03
POLR3DP05423 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR3DP05423 AL353801.3-201ENST00000609898 542 ntBASIC21.51■■□□□ 1.03
POLR3DP05423 AC009154.2-201ENST00000621177 724 ntBASIC21.51■■□□□ 1.03
POLR3DP05423 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
POLR3DP05423 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.51■■□□□ 1.03
POLR3DP05423 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.51■■□□□ 1.03
POLR3DP05423 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR3DP05423 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.51■■□□□ 1.03
POLR3DP05423 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR3DP05423 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR3DP05423 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR3DP05423 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.5■■□□□ 1.03
POLR3DP05423 BICD1-207ENST00000551848 1962 ntBASIC21.5■■□□□ 1.03
POLR3DP05423 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.5■■□□□ 1.03
POLR3DP05423 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms