Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNKO75909 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCNKO75909 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
CCNKO75909 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNKO75909 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNKO75909 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNKO75909 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNKO75909 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNKO75909 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 LINC02228-204ENST00000642115 2962 ntBASIC15.66■□□□□ 0.1
CCNKO75909 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNKO75909 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCNKO75909 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCNKO75909 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCNKO75909 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCNKO75909 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCNKO75909 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCNKO75909 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CCNKO75909 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNKO75909 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.65■□□□□ 0.1
CCNKO75909 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.65■□□□□ 0.1
CCNKO75909 UBE2DNL-204ENST00000602536 740 ntBASIC15.65■□□□□ 0.1
CCNKO75909 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCNKO75909 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CCNKO75909 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCNKO75909 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CCNKO75909 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCNKO75909 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.65■□□□□ 0.1
CCNKO75909 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNKO75909 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNKO75909 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.65■□□□□ 0.1
CCNKO75909 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CCNKO75909 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCNKO75909 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.64■□□□□ 0.09
CCNKO75909 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 AL096828.2-201ENST00000567259 1965 ntBASIC15.64■□□□□ 0.09
CCNKO75909 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.64■□□□□ 0.09
CCNKO75909 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCNKO75909 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCNKO75909 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCNKO75909 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.64■□□□□ 0.09
CCNKO75909 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CCNKO75909 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCNKO75909 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 AL138688.1-201ENST00000624851 1594 ntBASIC15.64■□□□□ 0.09
CCNKO75909 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.64■□□□□ 0.09
CCNKO75909 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNKO75909 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms