Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 FLJ13224-201ENST00000313737 1514 ntBASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 AP002383.4-201ENST00000442518 975 ntBASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 AL390719.2-201ENST00000606993 987 ntBASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF3C4Q9UKN8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 IGHGP-201ENST00000390555 1178 ntBASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 GPR32P1-201ENST00000601788 811 ntBASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 AC067852.2-201ENST00000590513 2313 ntBASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.42■□□□□ 0.7
GTF3C4Q9UKN8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 PCDHB18P-201ENST00000524813 2368 ntBASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 CHCHD2P8-201ENST00000429873 447 ntBASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms