Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.61■□□□□ 0.41
CLK4Q9HAZ1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 RNF152P1-201ENST00000397754 604 ntBASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLK4Q9HAZ1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 KRT18P23-201ENST00000435622 1283 ntBASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 HOMER2P1-201ENST00000455653 964 ntBASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 AC104390.1-201ENST00000555663 520 ntBASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 LINC01238-205ENST00000567549 1107 ntBASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLK4Q9HAZ1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 AC084018.2-201ENST00000613093 2607 ntBASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.58■□□□□ 0.41
CLK4Q9HAZ1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms