Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 AF228730.7-201ENST00000641842 219 ntBASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK5RAP2Q96SN8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDK5RAP2Q96SN8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDK5RAP2Q96SN8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDK5RAP2Q96SN8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDK5RAP2Q96SN8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 AL356309.3-201ENST00000624132 1934 ntBASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 AC098831.1-202ENST00000438821 336 ntBASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 AC009949.1-201ENST00000623048 1830 ntBASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.14■□□□□ 0.97
CDK5RAP2Q96SN8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 DDX43P3-201ENST00000441064 443 ntBASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 SIRPAP1-201ENST00000448467 1770 ntBASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP2Q96SN8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 AC034105.1-201ENST00000563488 319 ntBASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 AC019129.2-201ENST00000609837 1235 ntBASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 AC097374.2-201ENST00000618617 1306 ntBASIC21.12■□□□□ 0.97
CDK5RAP2Q96SN8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms