Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 AC007322.1-201ENST00000426983 750 ntBASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 AL513477.1-201ENST00000602865 2407 ntBASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC6LQ2NKX8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.14■□□□□ 0.66
ERCC6LQ2NKX8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
ERCC6LQ2NKX8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC6LQ2NKX8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC6LQ2NKX8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 IKBKGP1-201ENST00000612193 1073 ntBASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC6LQ2NKX8 HYMAI-201ENST00000635591 3347 ntBASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 AC004911.1-201ENST00000416316 871 ntBASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC6LQ2NKX8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 KRT8P11-201ENST00000409686 1436 ntBASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 AC103702.1-201ENST00000548801 2630 ntBASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms