Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP2B1P20020 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP2B1P20020 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ATP2B1P20020 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2B1P20020 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2B1P20020 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2B1P20020 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.83■□□□□ 0.92
ATP2B1P20020 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B1P20020 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B1P20020 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.83■□□□□ 0.92
ATP2B1P20020 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B1P20020 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B1P20020 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B1P20020 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
ATP2B1P20020 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2B1P20020 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATP2B1P20020 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATP2B1P20020 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2B1P20020 TSPY5P-201ENST00000426936 936 ntBASIC20.82■□□□□ 0.92
ATP2B1P20020 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.82■□□□□ 0.92
ATP2B1P20020 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2B1P20020 AL359075.1-203ENST00000462729 1002 ntBASIC20.82■□□□□ 0.92
ATP2B1P20020 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP2B1P20020 AC034232.1-201ENST00000506026 1064 ntBASIC20.82■□□□□ 0.92
ATP2B1P20020 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2B1P20020 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2B1P20020 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP2B1P20020 AC079602.3-201ENST00000623931 403 ntBASIC20.82■□□□□ 0.92
ATP2B1P20020 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2B1P20020 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATP2B1P20020 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2B1P20020 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2B1P20020 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2B1P20020 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B1P20020 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2B1P20020 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2B1P20020 AP000997.3-201ENST00000623333 2250 ntBASIC20.81■□□□□ 0.92
ATP2B1P20020 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2B1P20020 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ATP2B1P20020 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 KRT18P38-201ENST00000449496 1282 ntBASIC20.81■□□□□ 0.92
ATP2B1P20020 AC092597.1-201ENST00000487352 616 ntBASIC20.81■□□□□ 0.92
ATP2B1P20020 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP2B1P20020 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP2B1P20020 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
ATP2B1P20020 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2B1P20020 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATP2B1P20020 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B1P20020 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B1P20020 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
ATP2B1P20020 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B1P20020 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2B1P20020 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATP2B1P20020 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
ATP2B1P20020 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATP2B1P20020 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATP2B1P20020 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
ATP2B1P20020 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 RNF152P1-201ENST00000397754 604 ntBASIC20.8■□□□□ 0.92
ATP2B1P20020 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.8■□□□□ 0.92
ATP2B1P20020 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP2B1P20020 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
ATP2B1P20020 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP2B1P20020 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2B1P20020 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms