Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC092028.1-203ENST00000608262 953 ntBASIC14.55□□□□□ -0.08
APOC3P02656 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.55□□□□□ -0.08
APOC3P02656 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC3P02656 AL138688.1-201ENST00000624851 1594 ntBASIC14.55□□□□□ -0.08
APOC3P02656 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.55□□□□□ -0.08
APOC3P02656 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC3P02656 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
APOC3P02656 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC3P02656 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOC3P02656 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOC3P02656 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 KRT18P60-201ENST00000312876 1297 ntBASIC14.54□□□□□ -0.08
APOC3P02656 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOC3P02656 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOC3P02656 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
APOC3P02656 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC3P02656 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
APOC3P02656 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.54□□□□□ -0.08
APOC3P02656 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC3P02656 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
APOC3P02656 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC3P02656 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
APOC3P02656 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
APOC3P02656 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
APOC3P02656 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
APOC3P02656 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC3P02656 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC3P02656 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 HLA-G-202ENST00000376815 851 ntBASIC14.53□□□□□ -0.08
APOC3P02656 HLA-G-203ENST00000376818 1127 ntBASIC14.53□□□□□ -0.08
APOC3P02656 MIR639-201ENST00000384974 98 ntBASIC14.53□□□□□ -0.08
APOC3P02656 MIR4508-201ENST00000584178 70 ntBASIC14.53□□□□□ -0.08
APOC3P02656 AC010980.1-201ENST00000587192 1142 ntBASIC14.53□□□□□ -0.08
APOC3P02656 U85056.1-201ENST00000616429 682 ntBASIC14.53□□□□□ -0.08
APOC3P02656 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
APOC3P02656 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC3P02656 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
APOC3P02656 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.53□□□□□ -0.08
APOC3P02656 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
APOC3P02656 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.53□□□□□ -0.08
APOC3P02656 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC3P02656 AL161772.1-201ENST00000610494 4412 ntBASIC14.52□□□□□ -0.08
APOC3P02656 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms