Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 NUS1P2-201ENST00000417358 873 ntBASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 KRT16P4-201ENST00000453883 522 ntBASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 UNC93B7-201ENST00000509439 705 ntBASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 LINC01711-201ENST00000598340 967 ntBASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 AL138831.2-201ENST00000606564 490 ntBASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBQLN1Q9UMX0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 AC125634.1-201ENST00000438758 1403 ntBASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 TPM4P1-201ENST00000436100 807 ntBASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 AC096582.2-201ENST00000510860 516 ntBASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 AC009533.2-201ENST00000543664 586 ntBASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
UBQLN1Q9UMX0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 AL121894.2-201ENST00000602977 491 ntBASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 AC114341.1-201ENST00000618070 349 ntBASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBQLN1Q9UMX0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBQLN1Q9UMX0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms