Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 RARRES2P1-201ENST00000474487 481 ntBASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 LINC02228-203ENST00000641970 1355 ntBASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHCHD1Q96BP2 AC068418.2-201ENST00000577309 3703 ntBASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 TUBB8P6-201ENST00000436895 1288 ntBASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 KRT18P16-201ENST00000510337 1294 ntBASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 AP001330.3-201ENST00000520123 633 ntBASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 UBE2DNL-204ENST00000602536 740 ntBASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 AC010536.3-201ENST00000620306 533 ntBASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.17□□□□□ -0.3
CHCHD1Q96BP2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHCHD1Q96BP2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms