Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN7P35236 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTPN7P35236 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN7P35236 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PTPN7P35236 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN7P35236 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN7P35236 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN7P35236 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN7P35236 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN7P35236 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN7P35236 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN7P35236 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
PTPN7P35236 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTPN7P35236 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN7P35236 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN7P35236 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PTPN7P35236 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTPN7P35236 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPN7P35236 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN7P35236 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTPN7P35236 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTPN7P35236 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN7P35236 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN7P35236 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.71■□□□□ 0.58
PTPN7P35236 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PTPN7P35236 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN7P35236 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 AC100803.2-201ENST00000562459 1963 ntBASIC18.7■□□□□ 0.58
PTPN7P35236 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN7P35236 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PTPN7P35236 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN7P35236 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN7P35236 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PTPN7P35236 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN7P35236 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN7P35236 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN7P35236 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN7P35236 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN7P35236 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN7P35236 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN7P35236 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN7P35236 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN7P35236 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PTPN7P35236 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PTPN7P35236 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN7P35236 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTPN7P35236 LINC01568-207ENST00000641790 1380 ntBASIC18.69■□□□□ 0.58
PTPN7P35236 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PTPN7P35236 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN7P35236 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN7P35236 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN7P35236 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN7P35236 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.69■□□□□ 0.58
PTPN7P35236 AL138966.2-201ENST00000621997 464 ntBASIC18.69■□□□□ 0.58
PTPN7P35236 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
PTPN7P35236 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 KRT89P-201ENST00000620027 1478 ntBASIC18.69■□□□□ 0.58
PTPN7P35236 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 KRT18P22-201ENST00000402024 1347 ntBASIC18.69■□□□□ 0.58
PTPN7P35236 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN7P35236 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTPN7P35236 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PTPN7P35236 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN7P35236 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
PTPN7P35236 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms