Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LAMA1P25391 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
LAMA1P25391 LAGE3P1-201ENST00000425356 484 ntBASIC17.62■□□□□ 0.41
LAMA1P25391 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.62■□□□□ 0.41
LAMA1P25391 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.62■□□□□ 0.41
LAMA1P25391 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.62■□□□□ 0.41
LAMA1P25391 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.62■□□□□ 0.41
LAMA1P25391 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
LAMA1P25391 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.62■□□□□ 0.41
LAMA1P25391 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LAMA1P25391 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LAMA1P25391 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.62■□□□□ 0.41
LAMA1P25391 MCCD1P2-201ENST00000423228 335 ntBASIC17.62■□□□□ 0.41
LAMA1P25391 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LAMA1P25391 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.62■□□□□ 0.41
LAMA1P25391 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.62■□□□□ 0.41
LAMA1P25391 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LAMA1P25391 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.62■□□□□ 0.41
LAMA1P25391 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.62■□□□□ 0.41
LAMA1P25391 ELL2P1-201ENST00000413990 1906 ntBASIC17.62■□□□□ 0.41
LAMA1P25391 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.62■□□□□ 0.41
LAMA1P25391 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LAMA1P25391 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 AC116562.4-201ENST00000641316 2276 ntBASIC17.61■□□□□ 0.41
LAMA1P25391 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.61■□□□□ 0.41
LAMA1P25391 PDPK2P-202ENST00000562415 1191 ntBASIC17.61■□□□□ 0.41
LAMA1P25391 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 NKAPP1-205ENST00000585790 367 ntBASIC17.61■□□□□ 0.41
LAMA1P25391 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.61■□□□□ 0.41
LAMA1P25391 AC009102.3-201ENST00000623118 1491 ntBASIC17.61■□□□□ 0.41
LAMA1P25391 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 SIGLEC16-201ENST00000599858 1437 ntBASIC17.61■□□□□ 0.41
LAMA1P25391 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.61■□□□□ 0.41
LAMA1P25391 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.61■□□□□ 0.41
LAMA1P25391 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 AC006504.4-201ENST00000592118 1568 ntBASIC17.61■□□□□ 0.41
LAMA1P25391 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LAMA1P25391 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
LAMA1P25391 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 AC105339.3-201ENST00000560043 636 ntBASIC17.61■□□□□ 0.41
LAMA1P25391 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.61■□□□□ 0.41
LAMA1P25391 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.61■□□□□ 0.41
LAMA1P25391 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LAMA1P25391 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
LAMA1P25391 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.6■□□□□ 0.41
LAMA1P25391 ESPNP-201ENST00000270691 2015 ntBASIC17.6■□□□□ 0.41
LAMA1P25391 AC079776.2-201ENST00000641154 1609 ntBASIC17.6■□□□□ 0.41
LAMA1P25391 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.6■□□□□ 0.41
LAMA1P25391 KRT18P28-201ENST00000453838 1332 ntBASIC17.6■□□□□ 0.41
LAMA1P25391 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
LAMA1P25391 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.6■□□□□ 0.41
LAMA1P25391 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 AL078644.1-201ENST00000609881 752 ntBASIC17.6■□□□□ 0.41
LAMA1P25391 C20orf181-201ENST00000623918 480 ntBASIC17.6■□□□□ 0.41
LAMA1P25391 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LAMA1P25391 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.6■□□□□ 0.41
LAMA1P25391 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
LAMA1P25391 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
LAMA1P25391 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
LAMA1P25391 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
LAMA1P25391 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LAMA1P25391 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMA1P25391 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMA1P25391 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMA1P25391 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LAMA1P25391 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.59■□□□□ 0.41
LAMA1P25391 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LAMA1P25391 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LAMA1P25391 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LAMA1P25391 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms