Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
OPN1SWP03999 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
OPN1SWP03999 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.93■□□□□ 0.3
OPN1SWP03999 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.93■□□□□ 0.3
OPN1SWP03999 AP003071.4-201ENST00000562276 1284 ntBASIC16.93■□□□□ 0.3
OPN1SWP03999 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.93■□□□□ 0.3
OPN1SWP03999 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.93■□□□□ 0.3
OPN1SWP03999 AP005242.2-201ENST00000580065 1175 ntBASIC16.93■□□□□ 0.3
OPN1SWP03999 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.93■□□□□ 0.3
OPN1SWP03999 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.93■□□□□ 0.3
OPN1SWP03999 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
OPN1SWP03999 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.93■□□□□ 0.3
OPN1SWP03999 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
OPN1SWP03999 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
OPN1SWP03999 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
OPN1SWP03999 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.92■□□□□ 0.3
OPN1SWP03999 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.92■□□□□ 0.3
OPN1SWP03999 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
OPN1SWP03999 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
OPN1SWP03999 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.92■□□□□ 0.3
OPN1SWP03999 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
OPN1SWP03999 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.92■□□□□ 0.3
OPN1SWP03999 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
OPN1SWP03999 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.92■□□□□ 0.3
OPN1SWP03999 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
OPN1SWP03999 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.92■□□□□ 0.3
OPN1SWP03999 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
OPN1SWP03999 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.92■□□□□ 0.3
OPN1SWP03999 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPN1SWP03999 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.91■□□□□ 0.3
OPN1SWP03999 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
OPN1SWP03999 AC080080.1-201ENST00000625121 2420 ntBASIC16.91■□□□□ 0.3
OPN1SWP03999 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
OPN1SWP03999 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
OPN1SWP03999 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.91■□□□□ 0.3
OPN1SWP03999 AL390955.1-201ENST00000428694 934 ntBASIC16.91■□□□□ 0.3
OPN1SWP03999 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.91■□□□□ 0.3
OPN1SWP03999 Z99916.2-201ENST00000604037 246 ntBASIC16.91■□□□□ 0.3
OPN1SWP03999 AL023803.3-201ENST00000615559 522 ntBASIC16.91■□□□□ 0.3
OPN1SWP03999 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
OPN1SWP03999 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.91■□□□□ 0.3
OPN1SWP03999 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.91■□□□□ 0.3
OPN1SWP03999 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
OPN1SWP03999 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
OPN1SWP03999 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPN1SWP03999 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.9■□□□□ 0.3
OPN1SWP03999 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
OPN1SWP03999 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPN1SWP03999 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPN1SWP03999 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPN1SWP03999 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
OPN1SWP03999 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
OPN1SWP03999 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
OPN1SWP03999 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
OPN1SWP03999 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
OPN1SWP03999 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OPN1SWP03999 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
OPN1SWP03999 RBM17P1-201ENST00000453646 1190 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms