Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.62■□□□□ 0.73
EXTL3O43909 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 AP000997.3-201ENST00000623333 2250 ntBASIC19.62■□□□□ 0.73
EXTL3O43909 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.61■□□□□ 0.73
EXTL3O43909 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EXTL3O43909 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.61■□□□□ 0.73
EXTL3O43909 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 AC022898.2-201ENST00000616822 1312 ntBASIC19.61■□□□□ 0.73
EXTL3O43909 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.61■□□□□ 0.73
EXTL3O43909 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 AC068472.1-201ENST00000474589 881 ntBASIC19.61■□□□□ 0.73
EXTL3O43909 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.61■□□□□ 0.73
EXTL3O43909 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.61■□□□□ 0.73
EXTL3O43909 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
EXTL3O43909 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.61■□□□□ 0.73
EXTL3O43909 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 AC069148.1-201ENST00000608741 768 ntBASIC19.61■□□□□ 0.73
EXTL3O43909 AC093458.2-201ENST00000623150 629 ntBASIC19.61■□□□□ 0.73
EXTL3O43909 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.61■□□□□ 0.73
EXTL3O43909 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.61■□□□□ 0.73
EXTL3O43909 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EXTL3O43909 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
EXTL3O43909 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
EXTL3O43909 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.61■□□□□ 0.73
EXTL3O43909 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EXTL3O43909 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.6■□□□□ 0.73
EXTL3O43909 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.6■□□□□ 0.73
EXTL3O43909 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
EXTL3O43909 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.6■□□□□ 0.73
EXTL3O43909 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.6■□□□□ 0.73
EXTL3O43909 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.6■□□□□ 0.73
EXTL3O43909 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
EXTL3O43909 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.6■□□□□ 0.73
EXTL3O43909 AL592071.1-201ENST00000611956 408 ntBASIC19.6■□□□□ 0.73
EXTL3O43909 IGHV3-41-201ENST00000613121 348 ntBASIC19.6■□□□□ 0.73
EXTL3O43909 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.6■□□□□ 0.73
EXTL3O43909 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
EXTL3O43909 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.6■□□□□ 0.73
EXTL3O43909 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EXTL3O43909 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.6■□□□□ 0.73
EXTL3O43909 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.6■□□□□ 0.73
EXTL3O43909 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
EXTL3O43909 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EXTL3O43909 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.59■□□□□ 0.73
EXTL3O43909 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.59■□□□□ 0.73
EXTL3O43909 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EXTL3O43909 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EXTL3O43909 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
EXTL3O43909 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EXTL3O43909 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
EXTL3O43909 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EXTL3O43909 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EXTL3O43909 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EXTL3O43909 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.59■□□□□ 0.73
EXTL3O43909 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms