Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRB4X5D2U9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 HLA-V-202ENST00000446817 847 ntBASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 MIR219A2-201ENST00000608502 1504 ntBASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRB4X5D2U9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DRB4X5D2U9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRB4X5D2U9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DRB4X5D2U9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRB4X5D2U9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DRB4X5D2U9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DRB4X5D2U9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DRB4X5D2U9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRB4X5D2U9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DRB4X5D2U9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DRB4X5D2U9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRB4X5D2U9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRB4X5D2U9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRB4X5D2U9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DRB4X5D2U9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DRB4X5D2U9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 WHAMMP3-201ENST00000611636 1609 ntBASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.43■□□□□ 0.54
HLA-DRB4X5D2U9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DRB4X5D2U9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DRB4X5D2U9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DRB4X5D2U9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DRB4X5D2U9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 AL449106.1-201ENST00000608517 1980 ntBASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HLA-DRB4X5D2U9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DRB4X5D2U9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.39■□□□□ 0.54
HLA-DRB4X5D2U9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DRB4X5D2U9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DRB4X5D2U9 MIR639-201ENST00000384974 98 ntBASIC18.39■□□□□ 0.53
HLA-DRB4X5D2U9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.39■□□□□ 0.53
HLA-DRB4X5D2U9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DRB4X5D2U9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.39■□□□□ 0.53
HLA-DRB4X5D2U9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DRB4X5D2U9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HLA-DRB4X5D2U9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HLA-DRB4X5D2U9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DRB4X5D2U9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DRB4X5D2U9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DRB4X5D2U9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DRB4X5D2U9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DRB4X5D2U9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.38■□□□□ 0.53
HLA-DRB4X5D2U9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DRB4X5D2U9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DRB4X5D2U9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DRB4X5D2U9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DRB4X5D2U9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DRB4X5D2U9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DRB4X5D2U9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DRB4X5D2U9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HLA-DRB4X5D2U9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DRB4X5D2U9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DRB4X5D2U9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms