Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC126177.7-201ENST00000547904 679 ntBASIC25.08■■□□□ 1.61
PCDHGC4Q9Y5F7 AL449106.1-201ENST00000608517 1980 ntBASIC25.07■■□□□ 1.6
PCDHGC4Q9Y5F7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PCDHGC4Q9Y5F7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC4Q9Y5F7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC4Q9Y5F7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDHGC4Q9Y5F7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC4Q9Y5F7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC4Q9Y5F7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGC4Q9Y5F7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGC4Q9Y5F7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHGC4Q9Y5F7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PCDHGC4Q9Y5F7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGC4Q9Y5F7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGC4Q9Y5F7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PCDHGC4Q9Y5F7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGC4Q9Y5F7 HSD17B1P1-201ENST00000590052 955 ntBASIC25.02■■□□□ 1.6
PCDHGC4Q9Y5F7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGC4Q9Y5F7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDHGC4Q9Y5F7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDHGC4Q9Y5F7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGC4Q9Y5F7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
PCDHGC4Q9Y5F7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGC4Q9Y5F7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25■■□□□ 1.59
PCDHGC4Q9Y5F7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGC4Q9Y5F7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGC4Q9Y5F7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25■■□□□ 1.59
PCDHGC4Q9Y5F7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGC4Q9Y5F7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGC4Q9Y5F7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGC4Q9Y5F7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGC4Q9Y5F7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGC4Q9Y5F7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC4Q9Y5F7 AL157400.5-201ENST00000507624 621 ntBASIC24.96■■□□□ 1.59
PCDHGC4Q9Y5F7 AC092296.2-201ENST00000589470 999 ntBASIC24.96■■□□□ 1.59
PCDHGC4Q9Y5F7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC4Q9Y5F7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC4Q9Y5F7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHGC4Q9Y5F7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGC4Q9Y5F7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGC4Q9Y5F7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.95■■□□□ 1.58
PCDHGC4Q9Y5F7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDHGC4Q9Y5F7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDHGC4Q9Y5F7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
PCDHGC4Q9Y5F7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGC4Q9Y5F7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGC4Q9Y5F7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
PCDHGC4Q9Y5F7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PCDHGC4Q9Y5F7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHGC4Q9Y5F7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGC4Q9Y5F7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGC4Q9Y5F7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
PCDHGC4Q9Y5F7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGC4Q9Y5F7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGC4Q9Y5F7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PCDHGC4Q9Y5F7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGC4Q9Y5F7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGC4Q9Y5F7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PCDHGC4Q9Y5F7 RNF126P1-201ENST00000567452 1320 ntBASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 AL359504.2-201ENST00000605506 1601 ntBASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 AL121749.1-202ENST00000609313 2153 ntBASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC4Q9Y5F7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHGC4Q9Y5F7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHGC4Q9Y5F7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGC4Q9Y5F7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHGC4Q9Y5F7 ECEL1P2-201ENST00000461596 1295 ntBASIC24.89■■□□□ 1.58
PCDHGC4Q9Y5F7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGC4Q9Y5F7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGC4Q9Y5F7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGC4Q9Y5F7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGC4Q9Y5F7 AP004609.3-201ENST00000610705 1884 ntBASIC24.88■■□□□ 1.57
PCDHGC4Q9Y5F7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
PCDHGC4Q9Y5F7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGC4Q9Y5F7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHGC4Q9Y5F7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms