Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
ATP6V0A4Q9HBG4 AL157400.5-201ENST00000507624 621 ntBASIC27.57■■■□□ 2
ATP6V0A4Q9HBG4 AC012354.3-201ENST00000623734 483 ntBASIC27.57■■■□□ 2
ATP6V0A4Q9HBG4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.56■■■□□ 2
ATP6V0A4Q9HBG4 WHAMMP3-201ENST00000611636 1609 ntBASIC27.56■■■□□ 2
ATP6V0A4Q9HBG4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.55■■■□□ 2
ATP6V0A4Q9HBG4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
ATP6V0A4Q9HBG4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
ATP6V0A4Q9HBG4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.55■■■□□ 2
ATP6V0A4Q9HBG4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
ATP6V0A4Q9HBG4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
ATP6V0A4Q9HBG4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.54■■■□□ 2
ATP6V0A4Q9HBG4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ATP6V0A4Q9HBG4 ECEL1P2-201ENST00000461596 1295 ntBASIC27.53■■■□□ 2
ATP6V0A4Q9HBG4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.53■■■□□ 2
ATP6V0A4Q9HBG4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.53■■■□□ 2
ATP6V0A4Q9HBG4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ATP6V0A4Q9HBG4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
ATP6V0A4Q9HBG4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
ATP6V0A4Q9HBG4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.52■■■□□ 2
ATP6V0A4Q9HBG4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.52■■■□□ 2
ATP6V0A4Q9HBG4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
ATP6V0A4Q9HBG4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
ATP6V0A4Q9HBG4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ATP6V0A4Q9HBG4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.51■■□□□ 1.99
ATP6V0A4Q9HBG4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
ATP6V0A4Q9HBG4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.5■■□□□ 1.99
ATP6V0A4Q9HBG4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
ATP6V0A4Q9HBG4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
ATP6V0A4Q9HBG4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.5■■□□□ 1.99
ATP6V0A4Q9HBG4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.49■■□□□ 1.99
ATP6V0A4Q9HBG4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
ATP6V0A4Q9HBG4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.49■■□□□ 1.99
ATP6V0A4Q9HBG4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
ATP6V0A4Q9HBG4 U85056.1-201ENST00000616429 682 ntBASIC27.49■■□□□ 1.99
ATP6V0A4Q9HBG4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ATP6V0A4Q9HBG4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ATP6V0A4Q9HBG4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ATP6V0A4Q9HBG4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.48■■□□□ 1.99
ATP6V0A4Q9HBG4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
ATP6V0A4Q9HBG4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ATP6V0A4Q9HBG4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ATP6V0A4Q9HBG4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.47■■□□□ 1.99
ATP6V0A4Q9HBG4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ATP6V0A4Q9HBG4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
ATP6V0A4Q9HBG4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
ATP6V0A4Q9HBG4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
ATP6V0A4Q9HBG4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
ATP6V0A4Q9HBG4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
ATP6V0A4Q9HBG4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.45■■□□□ 1.98
ATP6V0A4Q9HBG4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ATP6V0A4Q9HBG4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ATP6V0A4Q9HBG4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ATP6V0A4Q9HBG4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ATP6V0A4Q9HBG4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.44■■□□□ 1.98
ATP6V0A4Q9HBG4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
ATP6V0A4Q9HBG4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ATP6V0A4Q9HBG4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.43■■□□□ 1.98
ATP6V0A4Q9HBG4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ATP6V0A4Q9HBG4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.43■■□□□ 1.98
ATP6V0A4Q9HBG4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ATP6V0A4Q9HBG4 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.41■■□□□ 1.98
ATP6V0A4Q9HBG4 AL449106.1-201ENST00000608517 1980 ntBASIC27.41■■□□□ 1.98
ATP6V0A4Q9HBG4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ATP6V0A4Q9HBG4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
ATP6V0A4Q9HBG4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.41■■□□□ 1.98
ATP6V0A4Q9HBG4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.41■■□□□ 1.98
ATP6V0A4Q9HBG4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ATP6V0A4Q9HBG4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ATP6V0A4Q9HBG4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.4■■□□□ 1.98
ATP6V0A4Q9HBG4 AL033527.3-201ENST00000566366 1196 ntBASIC27.4■■□□□ 1.98
ATP6V0A4Q9HBG4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ATP6V0A4Q9HBG4 SMPD5-203ENST00000639008 1464 ntBASIC27.38■■□□□ 1.97
ATP6V0A4Q9HBG4 AC025884.2-201ENST00000553429 711 ntBASIC27.38■■□□□ 1.97
ATP6V0A4Q9HBG4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.38■■□□□ 1.97
ATP6V0A4Q9HBG4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ATP6V0A4Q9HBG4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
ATP6V0A4Q9HBG4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.38■■□□□ 1.97
ATP6V0A4Q9HBG4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.37■■□□□ 1.97
ATP6V0A4Q9HBG4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATP6V0A4Q9HBG4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
ATP6V0A4Q9HBG4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATP6V0A4Q9HBG4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATP6V0A4Q9HBG4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATP6V0A4Q9HBG4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
ATP6V0A4Q9HBG4 AL359504.2-201ENST00000605506 1601 ntBASIC27.35■■□□□ 1.97
ATP6V0A4Q9HBG4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
ATP6V0A4Q9HBG4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ATP6V0A4Q9HBG4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
ATP6V0A4Q9HBG4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.35■■□□□ 1.97
ATP6V0A4Q9HBG4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.35■■□□□ 1.97
ATP6V0A4Q9HBG4 AC007029.1-201ENST00000604183 313 ntBASIC27.35■■□□□ 1.97
ATP6V0A4Q9HBG4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
ATP6V0A4Q9HBG4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ATP6V0A4Q9HBG4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.34■■□□□ 1.97
ATP6V0A4Q9HBG4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.34■■□□□ 1.97
ATP6V0A4Q9HBG4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V0A4Q9HBG4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V0A4Q9HBG4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V0A4Q9HBG4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms