Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RNF41Q9H4P4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.35■■■□□ 2.29
RNF41Q9H4P4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
RNF41Q9H4P4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
RNF41Q9H4P4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RNF41Q9H4P4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.34■■■□□ 2.29
RNF41Q9H4P4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RNF41Q9H4P4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
RNF41Q9H4P4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RNF41Q9H4P4 AC092296.2-201ENST00000589470 999 ntBASIC29.33■■■□□ 2.29
RNF41Q9H4P4 AL449106.1-201ENST00000608517 1980 ntBASIC29.32■■■□□ 2.28
RNF41Q9H4P4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.32■■■□□ 2.28
RNF41Q9H4P4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RNF41Q9H4P4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RNF41Q9H4P4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RNF41Q9H4P4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
RNF41Q9H4P4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RNF41Q9H4P4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RNF41Q9H4P4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RNF41Q9H4P4 RNF126P1-201ENST00000567452 1320 ntBASIC29.29■■■□□ 2.28
RNF41Q9H4P4 AL157400.5-201ENST00000507624 621 ntBASIC29.29■■■□□ 2.28
RNF41Q9H4P4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.29■■■□□ 2.28
RNF41Q9H4P4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RNF41Q9H4P4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.28■■■□□ 2.28
RNF41Q9H4P4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
RNF41Q9H4P4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RNF41Q9H4P4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RNF41Q9H4P4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RNF41Q9H4P4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
RNF41Q9H4P4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RNF41Q9H4P4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RNF41Q9H4P4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RNF41Q9H4P4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RNF41Q9H4P4 ECEL1P2-201ENST00000461596 1295 ntBASIC29.26■■■□□ 2.27
RNF41Q9H4P4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RNF41Q9H4P4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.26■■■□□ 2.27
RNF41Q9H4P4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
RNF41Q9H4P4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.25■■■□□ 2.27
RNF41Q9H4P4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RNF41Q9H4P4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF41Q9H4P4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RNF41Q9H4P4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF41Q9H4P4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
RNF41Q9H4P4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
RNF41Q9H4P4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RNF41Q9H4P4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.24■■■□□ 2.27
RNF41Q9H4P4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
RNF41Q9H4P4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.24■■■□□ 2.27
RNF41Q9H4P4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
RNF41Q9H4P4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
RNF41Q9H4P4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.21■■■□□ 2.27
RNF41Q9H4P4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RNF41Q9H4P4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
RNF41Q9H4P4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.2■■■□□ 2.26
RNF41Q9H4P4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
RNF41Q9H4P4 RARRES2P2-201ENST00000394842 485 ntBASIC29.19■■■□□ 2.26
RNF41Q9H4P4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
RNF41Q9H4P4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RNF41Q9H4P4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RNF41Q9H4P4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RNF41Q9H4P4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RNF41Q9H4P4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RNF41Q9H4P4 AL359504.2-201ENST00000605506 1601 ntBASIC29.17■■■□□ 2.26
RNF41Q9H4P4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RNF41Q9H4P4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.17■■■□□ 2.26
RNF41Q9H4P4 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.17■■■□□ 2.26
RNF41Q9H4P4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.17■■■□□ 2.26
RNF41Q9H4P4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RNF41Q9H4P4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.16■■■□□ 2.26
RNF41Q9H4P4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.16■■■□□ 2.26
RNF41Q9H4P4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
RNF41Q9H4P4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
RNF41Q9H4P4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.15■■■□□ 2.26
RNF41Q9H4P4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF41Q9H4P4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
RNF41Q9H4P4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF41Q9H4P4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.14■■■□□ 2.26
RNF41Q9H4P4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.14■■■□□ 2.26
RNF41Q9H4P4 AC025884.2-201ENST00000553429 711 ntBASIC29.14■■■□□ 2.26
RNF41Q9H4P4 SMPD5-203ENST00000639008 1464 ntBASIC29.14■■■□□ 2.26
RNF41Q9H4P4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF41Q9H4P4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
RNF41Q9H4P4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RNF41Q9H4P4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RNF41Q9H4P4 AC142472.1-201ENST00000612013 1741 ntBASIC29.13■■■□□ 2.25
RNF41Q9H4P4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF41Q9H4P4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF41Q9H4P4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF41Q9H4P4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.12■■■□□ 2.25
RNF41Q9H4P4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.12■■■□□ 2.25
RNF41Q9H4P4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
RNF41Q9H4P4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.11■■■□□ 2.25
RNF41Q9H4P4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RNF41Q9H4P4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RNF41Q9H4P4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.1■■■□□ 2.25
RNF41Q9H4P4 AP004609.3-201ENST00000610705 1884 ntBASIC29.1■■■□□ 2.25
RNF41Q9H4P4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RNF41Q9H4P4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.09■■■□□ 2.25
RNF41Q9H4P4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.09■■■□□ 2.25
RNF41Q9H4P4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms