Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.71■■□□□ 1.23
SPENQ96T58 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
SPENQ96T58 AC131212.1-201ENST00000613771 668 ntBASIC22.7■■□□□ 1.23
SPENQ96T58 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPENQ96T58 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPENQ96T58 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
SPENQ96T58 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.7■■□□□ 1.22
SPENQ96T58 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SPENQ96T58 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SPENQ96T58 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.69■■□□□ 1.22
SPENQ96T58 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
SPENQ96T58 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.69■■□□□ 1.22
SPENQ96T58 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.69■■□□□ 1.22
SPENQ96T58 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.69■■□□□ 1.22
SPENQ96T58 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SPENQ96T58 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SPENQ96T58 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SPENQ96T58 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.68■■□□□ 1.22
SPENQ96T58 AC103724.3-201ENST00000564481 992 ntBASIC22.68■■□□□ 1.22
SPENQ96T58 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SPENQ96T58 PVT1_1.1-201ENST00000615125 194 ntBASIC22.68■■□□□ 1.22
SPENQ96T58 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.67■■□□□ 1.22
SPENQ96T58 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.67■■□□□ 1.22
SPENQ96T58 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPENQ96T58 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPENQ96T58 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SPENQ96T58 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPENQ96T58 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.66■■□□□ 1.22
SPENQ96T58 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPENQ96T58 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPENQ96T58 AL139393.2-201ENST00000608721 2025 ntBASIC22.65■■□□□ 1.22
SPENQ96T58 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPENQ96T58 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.65■■□□□ 1.22
SPENQ96T58 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPENQ96T58 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
SPENQ96T58 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.64■■□□□ 1.22
SPENQ96T58 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.64■■□□□ 1.21
SPENQ96T58 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.64■■□□□ 1.21
SPENQ96T58 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.63■■□□□ 1.21
SPENQ96T58 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.63■■□□□ 1.21
SPENQ96T58 MIR6765-201ENST00000614092 87 ntBASIC22.63■■□□□ 1.21
SPENQ96T58 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SPENQ96T58 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SPENQ96T58 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
SPENQ96T58 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPENQ96T58 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.62■■□□□ 1.21
SPENQ96T58 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPENQ96T58 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SPENQ96T58 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SPENQ96T58 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPENQ96T58 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPENQ96T58 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.61■■□□□ 1.21
SPENQ96T58 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SPENQ96T58 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.61■■□□□ 1.21
SPENQ96T58 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPENQ96T58 AC139426.1-201ENST00000568218 2529 ntBASIC22.61■■□□□ 1.21
SPENQ96T58 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPENQ96T58 MIR4508-201ENST00000584178 70 ntBASIC22.61■■□□□ 1.21
SPENQ96T58 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPENQ96T58 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.6■■□□□ 1.21
SPENQ96T58 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.6■■□□□ 1.21
SPENQ96T58 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SPENQ96T58 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SPENQ96T58 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SPENQ96T58 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPENQ96T58 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.59■■□□□ 1.21
SPENQ96T58 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.58■■□□□ 1.21
SPENQ96T58 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
SPENQ96T58 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
SPENQ96T58 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.58■■□□□ 1.2
SPENQ96T58 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.58■■□□□ 1.2
SPENQ96T58 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPENQ96T58 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
SPENQ96T58 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SPENQ96T58 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPENQ96T58 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.57■■□□□ 1.2
SPENQ96T58 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SPENQ96T58 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPENQ96T58 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPENQ96T58 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPENQ96T58 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.56■■□□□ 1.2
SPENQ96T58 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.56■■□□□ 1.2
SPENQ96T58 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPENQ96T58 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPENQ96T58 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
SPENQ96T58 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.55■■□□□ 1.2
SPENQ96T58 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPENQ96T58 MIR935-201ENST00000401179 91 ntBASIC22.54■■□□□ 1.2
SPENQ96T58 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPENQ96T58 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPENQ96T58 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPENQ96T58 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.53■■□□□ 1.2
SPENQ96T58 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPENQ96T58 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SPENQ96T58 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.52■■□□□ 1.2
SPENQ96T58 AL356441.2-201ENST00000443009 864 ntBASIC22.52■■□□□ 1.2
SPENQ96T58 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.52■■□□□ 1.2
SPENQ96T58 BHLHE23-202ENST00000612929 1109 ntBASIC22.52■■□□□ 1.2
SPENQ96T58 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.52■■□□□ 1.2
SPENQ96T58 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms