Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CSMD1Q96PZ7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
CSMD1Q96PZ7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
CSMD1Q96PZ7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 RARRES2P6-201ENST00000567333 442 ntBASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 AC074183.2-201ENST00000623112 922 ntBASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSMD1Q96PZ7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.4■■□□□ 1.02
CSMD1Q96PZ7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSMD1Q96PZ7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CSMD1Q96PZ7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.4■■□□□ 1.02
CSMD1Q96PZ7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.4■■□□□ 1.02
CSMD1Q96PZ7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CSMD1Q96PZ7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CSMD1Q96PZ7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.39■■□□□ 1.01
CSMD1Q96PZ7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.39■■□□□ 1.01
CSMD1Q96PZ7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.38■■□□□ 1.01
CSMD1Q96PZ7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CSMD1Q96PZ7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSMD1Q96PZ7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSMD1Q96PZ7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.36■■□□□ 1.01
CSMD1Q96PZ7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSMD1Q96PZ7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSMD1Q96PZ7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CSMD1Q96PZ7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CSMD1Q96PZ7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.36■■□□□ 1.01
CSMD1Q96PZ7 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.36■■□□□ 1.01
CSMD1Q96PZ7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSMD1Q96PZ7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.35■■□□□ 1.01
CSMD1Q96PZ7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.35■■□□□ 1.01
CSMD1Q96PZ7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.35■■□□□ 1.01
CSMD1Q96PZ7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CSMD1Q96PZ7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD1Q96PZ7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD1Q96PZ7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD1Q96PZ7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD1Q96PZ7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSMD1Q96PZ7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CSMD1Q96PZ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CSMD1Q96PZ7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.33■■□□□ 1
CSMD1Q96PZ7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.33■■□□□ 1
CSMD1Q96PZ7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSMD1Q96PZ7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CSMD1Q96PZ7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSMD1Q96PZ7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CSMD1Q96PZ7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CSMD1Q96PZ7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSMD1Q96PZ7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSMD1Q96PZ7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CSMD1Q96PZ7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.31■■□□□ 1
CSMD1Q96PZ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.31■■□□□ 1
CSMD1Q96PZ7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.3■■□□□ 1
CSMD1Q96PZ7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
CSMD1Q96PZ7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.3■■□□□ 1
CSMD1Q96PZ7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.3■■□□□ 1
CSMD1Q96PZ7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
CSMD1Q96PZ7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSMD1Q96PZ7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.3■■□□□ 1
CSMD1Q96PZ7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSMD1Q96PZ7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSMD1Q96PZ7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.29■■□□□ 1
CSMD1Q96PZ7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSMD1Q96PZ7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.29■■□□□ 1
CSMD1Q96PZ7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.28■■□□□ 1
CSMD1Q96PZ7 AL359258.2-201ENST00000564063 1566 ntBASIC21.28■■□□□ 1
CSMD1Q96PZ7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.28■■□□□ 1
CSMD1Q96PZ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.28■■□□□ 1
CSMD1Q96PZ7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSMD1Q96PZ7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CSMD1Q96PZ7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSMD1Q96PZ7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.27■■□□□ 1
CSMD1Q96PZ7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.27■■□□□ 1
CSMD1Q96PZ7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.27■■□□□ 1
CSMD1Q96PZ7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.27■□□□□ 0.99
CSMD1Q96PZ7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.26■□□□□ 0.99
CSMD1Q96PZ7 AC093536.1-201ENST00000569153 554 ntBASIC21.26■□□□□ 0.99
CSMD1Q96PZ7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSMD1Q96PZ7 AC005837.3-201ENST00000612163 286 ntBASIC21.26■□□□□ 0.99
CSMD1Q96PZ7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSMD1Q96PZ7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSMD1Q96PZ7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.25■□□□□ 0.99
CSMD1Q96PZ7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.25■□□□□ 0.99
CSMD1Q96PZ7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSMD1Q96PZ7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.24■□□□□ 0.99
CSMD1Q96PZ7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSMD1Q96PZ7 UNC93B8-201ENST00000511903 705 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms