Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00479Q96M42 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.79■□□□□ 0.6
LINC00479Q96M42 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00479Q96M42 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LINC00479Q96M42 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00479Q96M42 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00479Q96M42 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.78■□□□□ 0.6
LINC00479Q96M42 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00479Q96M42 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00479Q96M42 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00479Q96M42 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00479Q96M42 ERN1-208ENST00000606895 2068 ntBASIC18.77■□□□□ 0.59
LINC00479Q96M42 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LINC00479Q96M42 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00479Q96M42 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00479Q96M42 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00479Q96M42 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00479Q96M42 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00479Q96M42 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC00479Q96M42 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00479Q96M42 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC00479Q96M42 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00479Q96M42 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC00479Q96M42 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LINC00479Q96M42 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00479Q96M42 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00479Q96M42 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LINC00479Q96M42 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00479Q96M42 MIR762-201ENST00000390236 83 ntBASIC18.74■□□□□ 0.59
LINC00479Q96M42 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00479Q96M42 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00479Q96M42 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00479Q96M42 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00479Q96M42 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC00479Q96M42 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.73■□□□□ 0.59
LINC00479Q96M42 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.72■□□□□ 0.59
LINC00479Q96M42 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LINC00479Q96M42 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00479Q96M42 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00479Q96M42 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00479Q96M42 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC00479Q96M42 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00479Q96M42 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00479Q96M42 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LINC00479Q96M42 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
LINC00479Q96M42 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
LINC00479Q96M42 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.71■□□□□ 0.59
LINC00479Q96M42 AC136428.2-201ENST00000563187 214 ntBASIC18.71■□□□□ 0.59
LINC00479Q96M42 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00479Q96M42 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00479Q96M42 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00479Q96M42 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LINC00479Q96M42 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LINC00479Q96M42 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00479Q96M42 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00479Q96M42 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00479Q96M42 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00479Q96M42 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00479Q96M42 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00479Q96M42 LINC00273-201ENST00000539813 1452 ntBASIC18.69■□□□□ 0.58
LINC00479Q96M42 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00479Q96M42 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00479Q96M42 AC142472.1-201ENST00000612013 1741 ntBASIC18.69■□□□□ 0.58
LINC00479Q96M42 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00479Q96M42 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC00479Q96M42 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC00479Q96M42 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LINC00479Q96M42 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00479Q96M42 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00479Q96M42 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00479Q96M42 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00479Q96M42 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00479Q96M42 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC00479Q96M42 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00479Q96M42 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC00479Q96M42 AC097358.2-201ENST00000607541 1159 ntBASIC18.67■□□□□ 0.58
LINC00479Q96M42 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00479Q96M42 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC00479Q96M42 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00479Q96M42 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC00479Q96M42 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00479Q96M42 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00479Q96M42 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00479Q96M42 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LINC00479Q96M42 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00479Q96M42 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00479Q96M42 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00479Q96M42 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.65■□□□□ 0.58
LINC00479Q96M42 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00479Q96M42 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC00479Q96M42 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms