Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
STAG1Q8WVM7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
STAG1Q8WVM7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.39■■■□□ 2.3
STAG1Q8WVM7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.39■■■□□ 2.3
STAG1Q8WVM7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
STAG1Q8WVM7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
STAG1Q8WVM7 AC092296.2-201ENST00000589470 999 ntBASIC29.37■■■□□ 2.29
STAG1Q8WVM7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.37■■■□□ 2.29
STAG1Q8WVM7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
STAG1Q8WVM7 AL449106.1-201ENST00000608517 1980 ntBASIC29.37■■■□□ 2.29
STAG1Q8WVM7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
STAG1Q8WVM7 AL157400.5-201ENST00000507624 621 ntBASIC29.36■■■□□ 2.29
STAG1Q8WVM7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
STAG1Q8WVM7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
STAG1Q8WVM7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.34■■■□□ 2.29
STAG1Q8WVM7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
STAG1Q8WVM7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
STAG1Q8WVM7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
STAG1Q8WVM7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
STAG1Q8WVM7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.33■■■□□ 2.29
STAG1Q8WVM7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
STAG1Q8WVM7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
STAG1Q8WVM7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.32■■■□□ 2.28
STAG1Q8WVM7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
STAG1Q8WVM7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
STAG1Q8WVM7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
STAG1Q8WVM7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
STAG1Q8WVM7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
STAG1Q8WVM7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
STAG1Q8WVM7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
STAG1Q8WVM7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.3■■■□□ 2.28
STAG1Q8WVM7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
STAG1Q8WVM7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
STAG1Q8WVM7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
STAG1Q8WVM7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
STAG1Q8WVM7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
STAG1Q8WVM7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
STAG1Q8WVM7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
STAG1Q8WVM7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.28■■■□□ 2.28
STAG1Q8WVM7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
STAG1Q8WVM7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
STAG1Q8WVM7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.27■■■□□ 2.28
STAG1Q8WVM7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
STAG1Q8WVM7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.26■■■□□ 2.27
STAG1Q8WVM7 ECEL1P2-201ENST00000461596 1295 ntBASIC29.26■■■□□ 2.27
STAG1Q8WVM7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
STAG1Q8WVM7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
STAG1Q8WVM7 ABHD17AP5-201ENST00000580133 923 ntBASIC29.25■■■□□ 2.27
STAG1Q8WVM7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
STAG1Q8WVM7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
STAG1Q8WVM7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
STAG1Q8WVM7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.24■■■□□ 2.27
STAG1Q8WVM7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.23■■■□□ 2.27
STAG1Q8WVM7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
STAG1Q8WVM7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
STAG1Q8WVM7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.23■■■□□ 2.27
STAG1Q8WVM7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.23■■■□□ 2.27
STAG1Q8WVM7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
STAG1Q8WVM7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
STAG1Q8WVM7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
STAG1Q8WVM7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
STAG1Q8WVM7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.21■■■□□ 2.27
STAG1Q8WVM7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
STAG1Q8WVM7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
STAG1Q8WVM7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.2■■■□□ 2.26
STAG1Q8WVM7 AL359504.2-201ENST00000605506 1601 ntBASIC29.2■■■□□ 2.26
STAG1Q8WVM7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
STAG1Q8WVM7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
STAG1Q8WVM7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.19■■■□□ 2.26
STAG1Q8WVM7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
STAG1Q8WVM7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
STAG1Q8WVM7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
STAG1Q8WVM7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
STAG1Q8WVM7 AC025884.2-201ENST00000553429 711 ntBASIC29.18■■■□□ 2.26
STAG1Q8WVM7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
STAG1Q8WVM7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.17■■■□□ 2.26
STAG1Q8WVM7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
STAG1Q8WVM7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.17■■■□□ 2.26
STAG1Q8WVM7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
STAG1Q8WVM7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.17■■■□□ 2.26
STAG1Q8WVM7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
STAG1Q8WVM7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
STAG1Q8WVM7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.16■■■□□ 2.26
STAG1Q8WVM7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
STAG1Q8WVM7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
STAG1Q8WVM7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.15■■■□□ 2.26
STAG1Q8WVM7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
STAG1Q8WVM7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
STAG1Q8WVM7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
STAG1Q8WVM7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.14■■■□□ 2.25
STAG1Q8WVM7 AC142472.1-201ENST00000612013 1741 ntBASIC29.14■■■□□ 2.25
STAG1Q8WVM7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.25
STAG1Q8WVM7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
STAG1Q8WVM7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
STAG1Q8WVM7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
STAG1Q8WVM7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
STAG1Q8WVM7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
STAG1Q8WVM7 SMPD5-203ENST00000639008 1464 ntBASIC29.12■■■□□ 2.25
STAG1Q8WVM7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.12■■■□□ 2.25
STAG1Q8WVM7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms