Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC133552.2-201ENST00000619106 1032 ntBASIC30.86■■■□□ 2.53
RTL9Q8NET4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
RTL9Q8NET4 RAP2CP1-202ENST00000605179 643 ntBASIC30.85■■■□□ 2.53
RTL9Q8NET4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
RTL9Q8NET4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RTL9Q8NET4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RTL9Q8NET4 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.84■■■□□ 2.53
RTL9Q8NET4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
RTL9Q8NET4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.83■■■□□ 2.53
RTL9Q8NET4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
RTL9Q8NET4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RTL9Q8NET4 AC093536.1-201ENST00000569153 554 ntBASIC30.82■■■□□ 2.52
RTL9Q8NET4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RTL9Q8NET4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RTL9Q8NET4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RTL9Q8NET4 MIR3960-201ENST00000583311 91 ntBASIC30.8■■■□□ 2.52
RTL9Q8NET4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RTL9Q8NET4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
RTL9Q8NET4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RTL9Q8NET4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.8■■■□□ 2.52
RTL9Q8NET4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
RTL9Q8NET4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.79■■■□□ 2.52
RTL9Q8NET4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RTL9Q8NET4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RTL9Q8NET4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
RTL9Q8NET4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RTL9Q8NET4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.78■■■□□ 2.52
RTL9Q8NET4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.78■■■□□ 2.52
RTL9Q8NET4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RTL9Q8NET4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.78■■■□□ 2.52
RTL9Q8NET4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.77■■■□□ 2.52
RTL9Q8NET4 WHAMMP3-201ENST00000611636 1609 ntBASIC30.77■■■□□ 2.52
RTL9Q8NET4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RTL9Q8NET4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
RTL9Q8NET4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
RTL9Q8NET4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RTL9Q8NET4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.76■■■□□ 2.51
RTL9Q8NET4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
RTL9Q8NET4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
RTL9Q8NET4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
RTL9Q8NET4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RTL9Q8NET4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.75■■■□□ 2.51
RTL9Q8NET4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
RTL9Q8NET4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
RTL9Q8NET4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
RTL9Q8NET4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RTL9Q8NET4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
RTL9Q8NET4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.74■■■□□ 2.51
RTL9Q8NET4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
RTL9Q8NET4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RTL9Q8NET4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RTL9Q8NET4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.73■■■□□ 2.51
RTL9Q8NET4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
RTL9Q8NET4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RTL9Q8NET4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
RTL9Q8NET4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
RTL9Q8NET4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
RTL9Q8NET4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.71■■■□□ 2.51
RTL9Q8NET4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.71■■■□□ 2.51
RTL9Q8NET4 AL359504.2-201ENST00000605506 1601 ntBASIC30.71■■■□□ 2.51
RTL9Q8NET4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.71■■■□□ 2.51
RTL9Q8NET4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
RTL9Q8NET4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RTL9Q8NET4 DRD5P2-201ENST00000421395 2012 ntBASIC30.69■■■□□ 2.5
RTL9Q8NET4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.69■■■□□ 2.5
RTL9Q8NET4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RTL9Q8NET4 DUX4L9-201ENST00000449051 1259 ntBASIC30.68■■■□□ 2.5
RTL9Q8NET4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.68■■■□□ 2.5
RTL9Q8NET4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RTL9Q8NET4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
RTL9Q8NET4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
RTL9Q8NET4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
RTL9Q8NET4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.66■■■□□ 2.5
RTL9Q8NET4 SPCS2P3-201ENST00000500401 656 ntBASIC30.66■■■□□ 2.5
RTL9Q8NET4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
RTL9Q8NET4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RTL9Q8NET4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC30.66■■■□□ 2.5
RTL9Q8NET4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.66■■■□□ 2.5
RTL9Q8NET4 DUX4L18-201ENST00000553347 1267 ntBASIC30.66■■■□□ 2.5
RTL9Q8NET4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RTL9Q8NET4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
RTL9Q8NET4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
RTL9Q8NET4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RTL9Q8NET4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
RTL9Q8NET4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
RTL9Q8NET4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.63■■■□□ 2.49
RTL9Q8NET4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.63■■■□□ 2.49
RTL9Q8NET4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.63■■■□□ 2.49
RTL9Q8NET4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.63■■■□□ 2.49
RTL9Q8NET4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.62■■■□□ 2.49
RTL9Q8NET4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
RTL9Q8NET4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RTL9Q8NET4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.62■■■□□ 2.49
RTL9Q8NET4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.62■■■□□ 2.49
RTL9Q8NET4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.62■■■□□ 2.49
RTL9Q8NET4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RTL9Q8NET4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RTL9Q8NET4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RTL9Q8NET4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
RTL9Q8NET4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms