Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.07■■■□□ 2.72
LINC00116Q8NCU8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.07■■■□□ 2.72
LINC00116Q8NCU8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
LINC00116Q8NCU8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32.05■■■□□ 2.72
LINC00116Q8NCU8 AC139795.1-202ENST00000500444 432 ntBASIC32.05■■■□□ 2.72
LINC00116Q8NCU8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
LINC00116Q8NCU8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
LINC00116Q8NCU8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
LINC00116Q8NCU8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
LINC00116Q8NCU8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
LINC00116Q8NCU8 MIR3960-201ENST00000583311 91 ntBASIC32.02■■■□□ 2.72
LINC00116Q8NCU8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
LINC00116Q8NCU8 HES6-204ENST00000409182 863 ntTSL 2 BASIC32.01■■■□□ 2.71
LINC00116Q8NCU8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.01■■■□□ 2.71
LINC00116Q8NCU8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
LINC00116Q8NCU8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32■■■□□ 2.71
LINC00116Q8NCU8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
LINC00116Q8NCU8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
LINC00116Q8NCU8 YBX1P4-201ENST00000392794 808 ntBASIC32■■■□□ 2.71
LINC00116Q8NCU8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC32■■■□□ 2.71
LINC00116Q8NCU8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
LINC00116Q8NCU8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.99■■■□□ 2.71
LINC00116Q8NCU8 AC019069.1-201ENST00000610008 1333 ntBASIC31.99■■■□□ 2.71
LINC00116Q8NCU8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
LINC00116Q8NCU8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
LINC00116Q8NCU8 GUSBP5-201ENST00000418136 578 ntBASIC31.98■■■□□ 2.71
LINC00116Q8NCU8 AC131212.1-201ENST00000613771 668 ntBASIC31.98■■■□□ 2.71
LINC00116Q8NCU8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.97■■■□□ 2.71
LINC00116Q8NCU8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.97■■■□□ 2.71
LINC00116Q8NCU8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.97■■■□□ 2.71
LINC00116Q8NCU8 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.97■■■□□ 2.71
LINC00116Q8NCU8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
LINC00116Q8NCU8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.97■■■□□ 2.71
LINC00116Q8NCU8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
LINC00116Q8NCU8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.96■■■□□ 2.71
LINC00116Q8NCU8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.96■■■□□ 2.71
LINC00116Q8NCU8 THA1P-201ENST00000590384 1145 ntBASIC31.96■■■□□ 2.71
LINC00116Q8NCU8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.96■■■□□ 2.71
LINC00116Q8NCU8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
LINC00116Q8NCU8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
LINC00116Q8NCU8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LINC00116Q8NCU8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
LINC00116Q8NCU8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LINC00116Q8NCU8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
LINC00116Q8NCU8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
LINC00116Q8NCU8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
LINC00116Q8NCU8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 MIR4508-201ENST00000584178 70 ntBASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 AC018755.3-202ENST00000596210 929 ntBASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.93■■■□□ 2.7
LINC00116Q8NCU8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LINC00116Q8NCU8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LINC00116Q8NCU8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LINC00116Q8NCU8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.91■■■□□ 2.7
LINC00116Q8NCU8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.91■■■□□ 2.7
LINC00116Q8NCU8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LINC00116Q8NCU8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.9■■■□□ 2.7
LINC00116Q8NCU8 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.9■■■□□ 2.7
LINC00116Q8NCU8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.9■■■□□ 2.7
LINC00116Q8NCU8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
LINC00116Q8NCU8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
LINC00116Q8NCU8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
LINC00116Q8NCU8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
LINC00116Q8NCU8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
LINC00116Q8NCU8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.88■■■□□ 2.69
LINC00116Q8NCU8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
LINC00116Q8NCU8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
LINC00116Q8NCU8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.87■■■□□ 2.69
LINC00116Q8NCU8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LINC00116Q8NCU8 AC103724.3-201ENST00000564481 992 ntBASIC31.87■■■□□ 2.69
LINC00116Q8NCU8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LINC00116Q8NCU8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.86■■■□□ 2.69
LINC00116Q8NCU8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.86■■■□□ 2.69
LINC00116Q8NCU8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.85■■■□□ 2.69
LINC00116Q8NCU8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.85■■■□□ 2.69
LINC00116Q8NCU8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LINC00116Q8NCU8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.85■■■□□ 2.69
LINC00116Q8NCU8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
LINC00116Q8NCU8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.84■■■□□ 2.69
LINC00116Q8NCU8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.84■■■□□ 2.69
LINC00116Q8NCU8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.84■■■□□ 2.69
LINC00116Q8NCU8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
LINC00116Q8NCU8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.83■■■□□ 2.69
LINC00116Q8NCU8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
LINC00116Q8NCU8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.83■■■□□ 2.69
LINC00116Q8NCU8 ABCB10P3-201ENST00000561950 2166 ntBASIC31.83■■■□□ 2.69
LINC00116Q8NCU8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
LINC00116Q8NCU8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
LINC00116Q8NCU8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
LINC00116Q8NCU8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.8■■■□□ 2.68
LINC00116Q8NCU8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.79■■■□□ 2.68
LINC00116Q8NCU8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.79■■■□□ 2.68
LINC00116Q8NCU8 AL031848.2-201ENST00000607670 837 ntBASIC31.79■■■□□ 2.68
LINC00116Q8NCU8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LINC00116Q8NCU8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms