Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRAM1L1Q8N609 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.61■■□□□ 1.53
TRAM1L1Q8N609 AC092296.2-201ENST00000589470 999 ntBASIC24.61■■□□□ 1.53
TRAM1L1Q8N609 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TRAM1L1Q8N609 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.6■■□□□ 1.53
TRAM1L1Q8N609 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRAM1L1Q8N609 AL449106.1-201ENST00000608517 1980 ntBASIC24.6■■□□□ 1.53
TRAM1L1Q8N609 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRAM1L1Q8N609 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRAM1L1Q8N609 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRAM1L1Q8N609 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRAM1L1Q8N609 AL157400.5-201ENST00000507624 621 ntBASIC24.58■■□□□ 1.53
TRAM1L1Q8N609 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
TRAM1L1Q8N609 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
TRAM1L1Q8N609 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.57■■□□□ 1.52
TRAM1L1Q8N609 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.57■■□□□ 1.52
TRAM1L1Q8N609 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRAM1L1Q8N609 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRAM1L1Q8N609 RNF126P1-201ENST00000567452 1320 ntBASIC24.57■■□□□ 1.52
TRAM1L1Q8N609 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
TRAM1L1Q8N609 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.56■■□□□ 1.52
TRAM1L1Q8N609 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRAM1L1Q8N609 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TRAM1L1Q8N609 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRAM1L1Q8N609 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRAM1L1Q8N609 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRAM1L1Q8N609 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRAM1L1Q8N609 ECEL1P2-201ENST00000461596 1295 ntBASIC24.55■■□□□ 1.52
TRAM1L1Q8N609 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRAM1L1Q8N609 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRAM1L1Q8N609 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRAM1L1Q8N609 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRAM1L1Q8N609 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRAM1L1Q8N609 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
TRAM1L1Q8N609 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRAM1L1Q8N609 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
TRAM1L1Q8N609 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
TRAM1L1Q8N609 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.53■■□□□ 1.52
TRAM1L1Q8N609 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.53■■□□□ 1.52
TRAM1L1Q8N609 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRAM1L1Q8N609 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRAM1L1Q8N609 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRAM1L1Q8N609 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.51■■□□□ 1.51
TRAM1L1Q8N609 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
TRAM1L1Q8N609 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.51■■□□□ 1.51
TRAM1L1Q8N609 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRAM1L1Q8N609 RARRES2P2-201ENST00000394842 485 ntBASIC24.49■■□□□ 1.51
TRAM1L1Q8N609 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRAM1L1Q8N609 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TRAM1L1Q8N609 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRAM1L1Q8N609 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRAM1L1Q8N609 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRAM1L1Q8N609 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TRAM1L1Q8N609 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRAM1L1Q8N609 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRAM1L1Q8N609 AL359504.2-201ENST00000605506 1601 ntBASIC24.47■■□□□ 1.51
TRAM1L1Q8N609 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRAM1L1Q8N609 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.47■■□□□ 1.51
TRAM1L1Q8N609 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRAM1L1Q8N609 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.47■■□□□ 1.51
TRAM1L1Q8N609 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.46■■□□□ 1.51
TRAM1L1Q8N609 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRAM1L1Q8N609 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.46■■□□□ 1.51
TRAM1L1Q8N609 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.46■■□□□ 1.51
TRAM1L1Q8N609 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.46■■□□□ 1.51
TRAM1L1Q8N609 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.46■■□□□ 1.51
TRAM1L1Q8N609 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRAM1L1Q8N609 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
TRAM1L1Q8N609 AC025884.2-201ENST00000553429 711 ntBASIC24.45■■□□□ 1.5
TRAM1L1Q8N609 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.45■■□□□ 1.5
TRAM1L1Q8N609 SMPD5-203ENST00000639008 1464 ntBASIC24.45■■□□□ 1.5
TRAM1L1Q8N609 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRAM1L1Q8N609 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
TRAM1L1Q8N609 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TRAM1L1Q8N609 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRAM1L1Q8N609 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRAM1L1Q8N609 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRAM1L1Q8N609 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TRAM1L1Q8N609 AC142472.1-201ENST00000612013 1741 ntBASIC24.44■■□□□ 1.5
TRAM1L1Q8N609 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.43■■□□□ 1.5
TRAM1L1Q8N609 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.43■■□□□ 1.5
TRAM1L1Q8N609 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.43■■□□□ 1.5
TRAM1L1Q8N609 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.43■■□□□ 1.5
TRAM1L1Q8N609 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRAM1L1Q8N609 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TRAM1L1Q8N609 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRAM1L1Q8N609 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.42■■□□□ 1.5
TRAM1L1Q8N609 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRAM1L1Q8N609 AP004609.3-201ENST00000610705 1884 ntBASIC24.41■■□□□ 1.5
TRAM1L1Q8N609 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRAM1L1Q8N609 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRAM1L1Q8N609 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRAM1L1Q8N609 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
TRAM1L1Q8N609 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.4■■□□□ 1.5
TRAM1L1Q8N609 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.4■■□□□ 1.5
TRAM1L1Q8N609 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.4■■□□□ 1.5
TRAM1L1Q8N609 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRAM1L1Q8N609 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
TRAM1L1Q8N609 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRAM1L1Q8N609 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms