Protein–RNA interactions for Protein: Q5T5X7

BEND3, BEN domain-containing protein 3, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3Q5T5X7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.37■■■□□ 2.61
BEND3Q5T5X7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
BEND3Q5T5X7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
BEND3Q5T5X7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
BEND3Q5T5X7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
BEND3Q5T5X7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
BEND3Q5T5X7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BEND3Q5T5X7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
BEND3Q5T5X7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BEND3Q5T5X7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BEND3Q5T5X7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.34■■■□□ 2.61
BEND3Q5T5X7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.34■■■□□ 2.61
BEND3Q5T5X7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BEND3Q5T5X7 ABHD17AP5-201ENST00000580133 923 ntBASIC31.33■■■□□ 2.61
BEND3Q5T5X7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
BEND3Q5T5X7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
BEND3Q5T5X7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
BEND3Q5T5X7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
BEND3Q5T5X7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.32■■■□□ 2.6
BEND3Q5T5X7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
BEND3Q5T5X7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
BEND3Q5T5X7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.31■■■□□ 2.6
BEND3Q5T5X7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.31■■■□□ 2.6
BEND3Q5T5X7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BEND3Q5T5X7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
BEND3Q5T5X7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
BEND3Q5T5X7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
BEND3Q5T5X7 AC025884.2-201ENST00000553429 711 ntBASIC31.28■■■□□ 2.6
BEND3Q5T5X7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
BEND3Q5T5X7 AL449106.1-201ENST00000608517 1980 ntBASIC31.26■■■□□ 2.6
BEND3Q5T5X7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.26■■■□□ 2.6
BEND3Q5T5X7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
BEND3Q5T5X7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.25■■■□□ 2.59
BEND3Q5T5X7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
BEND3Q5T5X7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.25■■■□□ 2.59
BEND3Q5T5X7 SMPD5-203ENST00000639008 1464 ntBASIC31.25■■■□□ 2.59
BEND3Q5T5X7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
BEND3Q5T5X7 AL359504.2-201ENST00000605506 1601 ntBASIC31.23■■■□□ 2.59
BEND3Q5T5X7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BEND3Q5T5X7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
BEND3Q5T5X7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
BEND3Q5T5X7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.21■■■□□ 2.59
BEND3Q5T5X7 AC007029.1-201ENST00000604183 313 ntBASIC31.21■■■□□ 2.59
BEND3Q5T5X7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
BEND3Q5T5X7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
BEND3Q5T5X7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
BEND3Q5T5X7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
BEND3Q5T5X7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.59
BEND3Q5T5X7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.2■■■□□ 2.58
BEND3Q5T5X7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.19■■■□□ 2.58
BEND3Q5T5X7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.19■■■□□ 2.58
BEND3Q5T5X7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.19■■■□□ 2.58
BEND3Q5T5X7 U85056.1-201ENST00000616429 682 ntBASIC31.19■■■□□ 2.58
BEND3Q5T5X7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
BEND3Q5T5X7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
BEND3Q5T5X7 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.19■■■□□ 2.58
BEND3Q5T5X7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
BEND3Q5T5X7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BEND3Q5T5X7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BEND3Q5T5X7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.18■■■□□ 2.58
BEND3Q5T5X7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.18■■■□□ 2.58
BEND3Q5T5X7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.18■■■□□ 2.58
BEND3Q5T5X7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
BEND3Q5T5X7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BEND3Q5T5X7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BEND3Q5T5X7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
BEND3Q5T5X7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BEND3Q5T5X7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BEND3Q5T5X7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
BEND3Q5T5X7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.16■■■□□ 2.58
BEND3Q5T5X7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
BEND3Q5T5X7 NTF6A-201ENST00000591175 560 ntBASIC31.15■■■□□ 2.58
BEND3Q5T5X7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.15■■■□□ 2.58
BEND3Q5T5X7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.14■■■□□ 2.58
BEND3Q5T5X7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
BEND3Q5T5X7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
BEND3Q5T5X7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
BEND3Q5T5X7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
BEND3Q5T5X7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
BEND3Q5T5X7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
BEND3Q5T5X7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
BEND3Q5T5X7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
BEND3Q5T5X7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.12■■■□□ 2.57
BEND3Q5T5X7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
BEND3Q5T5X7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
BEND3Q5T5X7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
BEND3Q5T5X7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
BEND3Q5T5X7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
BEND3Q5T5X7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.11■■■□□ 2.57
BEND3Q5T5X7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
BEND3Q5T5X7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
BEND3Q5T5X7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
BEND3Q5T5X7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.1■■■□□ 2.57
BEND3Q5T5X7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
BEND3Q5T5X7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
BEND3Q5T5X7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.09■■■□□ 2.57
BEND3Q5T5X7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
BEND3Q5T5X7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.09■■■□□ 2.57
BEND3Q5T5X7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.08■■■□□ 2.57
BEND3Q5T5X7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms