Protein–RNA interactions for Protein: Q03938

ZNF90, Zinc finger protein 90, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF90Q03938 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF90Q03938 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF90Q03938 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.5■□□□□ 0.71
ZNF90Q03938 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF90Q03938 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF90Q03938 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
ZNF90Q03938 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF90Q03938 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.49■□□□□ 0.71
ZNF90Q03938 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF90Q03938 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF90Q03938 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF90Q03938 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF90Q03938 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZNF90Q03938 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
ZNF90Q03938 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF90Q03938 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF90Q03938 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF90Q03938 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF90Q03938 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF90Q03938 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZNF90Q03938 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF90Q03938 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF90Q03938 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF90Q03938 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.7
ZNF90Q03938 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF90Q03938 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
ZNF90Q03938 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF90Q03938 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF90Q03938 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF90Q03938 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF90Q03938 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZNF90Q03938 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZNF90Q03938 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF90Q03938 AP006261.1-201ENST00000584783 668 ntBASIC19.44■□□□□ 0.7
ZNF90Q03938 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF90Q03938 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF90Q03938 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF90Q03938 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF90Q03938 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF90Q03938 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF90Q03938 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF90Q03938 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF90Q03938 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF90Q03938 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF90Q03938 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF90Q03938 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF90Q03938 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF90Q03938 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF90Q03938 AC087741.3-201ENST00000624270 1347 ntBASIC19.41■□□□□ 0.7
ZNF90Q03938 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF90Q03938 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF90Q03938 AC145676.1-201ENST00000514988 2004 ntBASIC19.41■□□□□ 0.7
ZNF90Q03938 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF90Q03938 AP004609.3-201ENST00000610705 1884 ntBASIC19.4■□□□□ 0.7
ZNF90Q03938 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF90Q03938 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF90Q03938 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF90Q03938 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF90Q03938 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF90Q03938 AC110285.7-201ENST00000624417 1536 ntBASIC19.39■□□□□ 0.69
ZNF90Q03938 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF90Q03938 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF90Q03938 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF90Q03938 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF90Q03938 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF90Q03938 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF90Q03938 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.38■□□□□ 0.69
ZNF90Q03938 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF90Q03938 AC020928.2-201ENST00000588717 2197 ntBASIC19.38■□□□□ 0.69
ZNF90Q03938 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZNF90Q03938 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF90Q03938 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF90Q03938 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF90Q03938 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF90Q03938 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF90Q03938 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF90Q03938 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF90Q03938 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF90Q03938 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF90Q03938 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF90Q03938 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF90Q03938 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF90Q03938 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF90Q03938 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF90Q03938 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF90Q03938 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF90Q03938 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF90Q03938 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF90Q03938 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF90Q03938 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF90Q03938 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF90Q03938 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF90Q03938 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF90Q03938 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF90Q03938 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF90Q03938 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF90Q03938 AL162393.1-201ENST00000437852 946 ntBASIC19.34■□□□□ 0.69
ZNF90Q03938 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ZNF90Q03938 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF90Q03938 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms