Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DRB3P79483 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRB3P79483 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRB3P79483 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-DRB3P79483 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DRB3P79483 DUSP8P4-201ENST00000399538 1761 ntBASIC20.56■□□□□ 0.88
HLA-DRB3P79483 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRB3P79483 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRB3P79483 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRB3P79483 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRB3P79483 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRB3P79483 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DRB3P79483 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRB3P79483 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRB3P79483 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRB3P79483 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.54■□□□□ 0.88
HLA-DRB3P79483 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRB3P79483 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DRB3P79483 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRB3P79483 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DRB3P79483 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DRB3P79483 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRB3P79483 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRB3P79483 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HLA-DRB3P79483 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRB3P79483 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DRB3P79483 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.52■□□□□ 0.88
HLA-DRB3P79483 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRB3P79483 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRB3P79483 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DRB3P79483 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRB3P79483 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRB3P79483 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DRB3P79483 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DRB3P79483 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DRB3P79483 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRB3P79483 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRB3P79483 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
HLA-DRB3P79483 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DRB3P79483 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DRB3P79483 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DRB3P79483 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DRB3P79483 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRB3P79483 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRB3P79483 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRB3P79483 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DRB3P79483 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRB3P79483 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRB3P79483 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DRB3P79483 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HLA-DRB3P79483 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.47■□□□□ 0.87
HLA-DRB3P79483 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRB3P79483 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HLA-DRB3P79483 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DRB3P79483 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DRB3P79483 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRB3P79483 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRB3P79483 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRB3P79483 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 LINC01971-201ENST00000617888 1048 ntBASIC20.46■□□□□ 0.87
HLA-DRB3P79483 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRB3P79483 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DRB3P79483 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DRB3P79483 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
HLA-DRB3P79483 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HLA-DRB3P79483 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.45■□□□□ 0.86
HLA-DRB3P79483 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DRB3P79483 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DRB3P79483 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HLA-DRB3P79483 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DRB3P79483 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DRB3P79483 AC020928.2-201ENST00000588717 2197 ntBASIC20.44■□□□□ 0.86
HLA-DRB3P79483 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DRB3P79483 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HLA-DRB3P79483 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DRB3P79483 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DRB3P79483 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms