Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TGFAP01135 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TGFAP01135 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TGFAP01135 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.46■□□□□ 0.87
TGFAP01135 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.46■□□□□ 0.87
TGFAP01135 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.46■□□□□ 0.87
TGFAP01135 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TGFAP01135 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TGFAP01135 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TGFAP01135 AC010980.1-201ENST00000587192 1142 ntBASIC20.46■□□□□ 0.87
TGFAP01135 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.46■□□□□ 0.87
TGFAP01135 RAP2CP1-202ENST00000605179 643 ntBASIC20.46■□□□□ 0.87
TGFAP01135 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TGFAP01135 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TGFAP01135 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
TGFAP01135 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.45■□□□□ 0.86
TGFAP01135 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.45■□□□□ 0.86
TGFAP01135 AC074183.2-201ENST00000623112 922 ntBASIC20.45■□□□□ 0.86
TGFAP01135 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TGFAP01135 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TGFAP01135 KRT8P33-201ENST00000508125 1423 ntBASIC20.44■□□□□ 0.86
TGFAP01135 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TGFAP01135 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TGFAP01135 AL451085.2-201ENST00000605085 799 ntBASIC20.44■□□□□ 0.86
TGFAP01135 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TGFAP01135 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TGFAP01135 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TGFAP01135 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TGFAP01135 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.44■□□□□ 0.86
TGFAP01135 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TGFAP01135 AP002414.2-202ENST00000590929 1450 ntBASIC20.43■□□□□ 0.86
TGFAP01135 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.43■□□□□ 0.86
TGFAP01135 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TGFAP01135 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TGFAP01135 AC018755.3-202ENST00000596210 929 ntBASIC20.43■□□□□ 0.86
TGFAP01135 MIR6765-201ENST00000614092 87 ntBASIC20.43■□□□□ 0.86
TGFAP01135 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TGFAP01135 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.42■□□□□ 0.86
TGFAP01135 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TGFAP01135 SPCS2P3-201ENST00000500401 656 ntBASIC20.42■□□□□ 0.86
TGFAP01135 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TGFAP01135 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.42■□□□□ 0.86
TGFAP01135 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.42■□□□□ 0.86
TGFAP01135 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.41■□□□□ 0.86
TGFAP01135 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.41■□□□□ 0.86
TGFAP01135 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.41■□□□□ 0.86
TGFAP01135 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TGFAP01135 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
TGFAP01135 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.4■□□□□ 0.86
TGFAP01135 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TGFAP01135 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.4■□□□□ 0.86
TGFAP01135 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TGFAP01135 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TGFAP01135 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
TGFAP01135 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TGFAP01135 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TGFAP01135 YBX1P4-201ENST00000392794 808 ntBASIC20.39■□□□□ 0.85
TGFAP01135 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TGFAP01135 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.39■□□□□ 0.85
TGFAP01135 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TGFAP01135 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.39■□□□□ 0.85
TGFAP01135 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.39■□□□□ 0.85
TGFAP01135 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.38■□□□□ 0.85
TGFAP01135 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TGFAP01135 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.37■□□□□ 0.85
TGFAP01135 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
TGFAP01135 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TGFAP01135 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TGFAP01135 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.37■□□□□ 0.85
TGFAP01135 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TGFAP01135 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.36■□□□□ 0.85
TGFAP01135 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TGFAP01135 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TGFAP01135 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TGFAP01135 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TGFAP01135 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.36■□□□□ 0.85
TGFAP01135 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TGFAP01135 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.35■□□□□ 0.85
TGFAP01135 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TGFAP01135 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TGFAP01135 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TGFAP01135 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TGFAP01135 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TGFAP01135 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TGFAP01135 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TGFAP01135 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TGFAP01135 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.34■□□□□ 0.85
TGFAP01135 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.34■□□□□ 0.85
TGFAP01135 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.34■□□□□ 0.85
TGFAP01135 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.34■□□□□ 0.85
TGFAP01135 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TGFAP01135 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TGFAP01135 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.33■□□□□ 0.85
TGFAP01135 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.33■□□□□ 0.85
TGFAP01135 AL359504.2-201ENST00000605506 1601 ntBASIC20.32■□□□□ 0.84
TGFAP01135 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TGFAP01135 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.32■□□□□ 0.84
TGFAP01135 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TGFAP01135 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TGFAP01135 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms