Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TOMM40O96008 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOMM40O96008 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.23■□□□□ 0.67
TOMM40O96008 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOMM40O96008 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.22■□□□□ 0.67
TOMM40O96008 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOMM40O96008 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.22■□□□□ 0.67
TOMM40O96008 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.22■□□□□ 0.67
TOMM40O96008 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOMM40O96008 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOMM40O96008 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TOMM40O96008 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TOMM40O96008 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOMM40O96008 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOMM40O96008 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.2■□□□□ 0.66
TOMM40O96008 WHAMMP3-201ENST00000611636 1609 ntBASIC19.2■□□□□ 0.66
TOMM40O96008 AC145676.1-201ENST00000514988 2004 ntBASIC19.2■□□□□ 0.66
TOMM40O96008 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOMM40O96008 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.2■□□□□ 0.66
TOMM40O96008 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.2■□□□□ 0.66
TOMM40O96008 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOMM40O96008 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOMM40O96008 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOMM40O96008 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TOMM40O96008 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.19■□□□□ 0.66
TOMM40O96008 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.19■□□□□ 0.66
TOMM40O96008 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.18■□□□□ 0.66
TOMM40O96008 AC142472.1-201ENST00000612013 1741 ntBASIC19.18■□□□□ 0.66
TOMM40O96008 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.18■□□□□ 0.66
TOMM40O96008 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOMM40O96008 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.18■□□□□ 0.66
TOMM40O96008 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.18■□□□□ 0.66
TOMM40O96008 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOMM40O96008 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOMM40O96008 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.17■□□□□ 0.66
TOMM40O96008 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOMM40O96008 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TOMM40O96008 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOMM40O96008 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TOMM40O96008 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TOMM40O96008 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOMM40O96008 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
TOMM40O96008 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.15■□□□□ 0.66
TOMM40O96008 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TOMM40O96008 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOMM40O96008 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOMM40O96008 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TOMM40O96008 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOMM40O96008 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TOMM40O96008 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.14■□□□□ 0.65
TOMM40O96008 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOMM40O96008 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.13■□□□□ 0.65
TOMM40O96008 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOMM40O96008 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.13■□□□□ 0.65
TOMM40O96008 LINC01971-201ENST00000617888 1048 ntBASIC19.13■□□□□ 0.65
TOMM40O96008 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.13■□□□□ 0.65
TOMM40O96008 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.13■□□□□ 0.65
TOMM40O96008 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOMM40O96008 AC092803.2-201ENST00000564287 1899 ntBASIC19.13■□□□□ 0.65
TOMM40O96008 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.12■□□□□ 0.65
TOMM40O96008 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOMM40O96008 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.12■□□□□ 0.65
TOMM40O96008 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOMM40O96008 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOMM40O96008 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOMM40O96008 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.11■□□□□ 0.65
TOMM40O96008 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.11■□□□□ 0.65
TOMM40O96008 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.11■□□□□ 0.65
TOMM40O96008 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOMM40O96008 DUSP8P4-201ENST00000399538 1761 ntBASIC19.11■□□□□ 0.65
TOMM40O96008 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.11■□□□□ 0.65
TOMM40O96008 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOMM40O96008 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOMM40O96008 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TOMM40O96008 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TOMM40O96008 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOMM40O96008 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOMM40O96008 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
TOMM40O96008 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TOMM40O96008 RPS2P35-201ENST00000443417 897 ntBASIC19.09■□□□□ 0.65
TOMM40O96008 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOMM40O96008 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOMM40O96008 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TOMM40O96008 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.08■□□□□ 0.65
TOMM40O96008 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TOMM40O96008 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TOMM40O96008 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOMM40O96008 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOMM40O96008 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TOMM40O96008 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TOMM40O96008 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TOMM40O96008 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.07■□□□□ 0.64
TOMM40O96008 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOMM40O96008 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TOMM40O96008 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TOMM40O96008 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOMM40O96008 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TOMM40O96008 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TOMM40O96008 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TOMM40O96008 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms