Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.23■■□□□ 1.15
PPP1R3DO95685 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PPP1R3DO95685 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPP1R3DO95685 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP1R3DO95685 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PPP1R3DO95685 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP1R3DO95685 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.22■■□□□ 1.15
PPP1R3DO95685 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP1R3DO95685 AC135731.1-201ENST00000569415 2548 ntBASIC22.22■■□□□ 1.15
PPP1R3DO95685 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP1R3DO95685 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.21■■□□□ 1.15
PPP1R3DO95685 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PPP1R3DO95685 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP1R3DO95685 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.2■■□□□ 1.14
PPP1R3DO95685 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PPP1R3DO95685 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.2■■□□□ 1.14
PPP1R3DO95685 DUSP8P4-201ENST00000399538 1761 ntBASIC22.2■■□□□ 1.14
PPP1R3DO95685 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP1R3DO95685 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP1R3DO95685 RPS2P35-201ENST00000443417 897 ntBASIC22.19■■□□□ 1.14
PPP1R3DO95685 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.19■■□□□ 1.14
PPP1R3DO95685 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP1R3DO95685 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.19■■□□□ 1.14
PPP1R3DO95685 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.18■■□□□ 1.14
PPP1R3DO95685 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP1R3DO95685 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.18■■□□□ 1.14
PPP1R3DO95685 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP1R3DO95685 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP1R3DO95685 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP1R3DO95685 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PPP1R3DO95685 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.17■■□□□ 1.14
PPP1R3DO95685 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP1R3DO95685 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP1R3DO95685 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.17■■□□□ 1.14
PPP1R3DO95685 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3DO95685 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3DO95685 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3DO95685 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3DO95685 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3DO95685 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3DO95685 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.16■■□□□ 1.14
PPP1R3DO95685 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.16■■□□□ 1.14
PPP1R3DO95685 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
PPP1R3DO95685 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.15■■□□□ 1.14
PPP1R3DO95685 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.15■■□□□ 1.14
PPP1R3DO95685 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP1R3DO95685 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP1R3DO95685 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.15■■□□□ 1.14
PPP1R3DO95685 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 AC020928.2-201ENST00000588717 2197 ntBASIC22.15■■□□□ 1.14
PPP1R3DO95685 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3DO95685 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PPP1R3DO95685 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP1R3DO95685 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP1R3DO95685 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
PPP1R3DO95685 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
PPP1R3DO95685 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP1R3DO95685 LINC01971-201ENST00000617888 1048 ntBASIC22.14■■□□□ 1.13
PPP1R3DO95685 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP1R3DO95685 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3DO95685 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.13■■□□□ 1.13
PPP1R3DO95685 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3DO95685 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3DO95685 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3DO95685 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3DO95685 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP1R3DO95685 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP1R3DO95685 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PPP1R3DO95685 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP1R3DO95685 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP1R3DO95685 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PPP1R3DO95685 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
PPP1R3DO95685 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PPP1R3DO95685 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3DO95685 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP1R3DO95685 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
PPP1R3DO95685 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
PPP1R3DO95685 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PPP1R3DO95685 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP1R3DO95685 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP1R3DO95685 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP1R3DO95685 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP1R3DO95685 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PPP1R3DO95685 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms