Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAF4O95104 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAF4O95104 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCAF4O95104 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20■□□□□ 0.79
SCAF4O95104 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCAF4O95104 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SCAF4O95104 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20■□□□□ 0.79
SCAF4O95104 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
SCAF4O95104 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCAF4O95104 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCAF4O95104 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAF4O95104 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAF4O95104 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.99■□□□□ 0.79
SCAF4O95104 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAF4O95104 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCAF4O95104 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.99■□□□□ 0.79
SCAF4O95104 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAF4O95104 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAF4O95104 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAF4O95104 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SCAF4O95104 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.98■□□□□ 0.79
SCAF4O95104 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.98■□□□□ 0.79
SCAF4O95104 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SCAF4O95104 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAF4O95104 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAF4O95104 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
SCAF4O95104 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.97■□□□□ 0.79
SCAF4O95104 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SCAF4O95104 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAF4O95104 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SCAF4O95104 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SCAF4O95104 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCAF4O95104 DUSP8P4-201ENST00000399538 1761 ntBASIC19.96■□□□□ 0.79
SCAF4O95104 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.96■□□□□ 0.79
SCAF4O95104 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAF4O95104 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAF4O95104 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAF4O95104 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SCAF4O95104 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCAF4O95104 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAF4O95104 AC087741.3-201ENST00000624270 1347 ntBASIC19.96■□□□□ 0.79
SCAF4O95104 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.95■□□□□ 0.78
SCAF4O95104 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCAF4O95104 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.95■□□□□ 0.78
SCAF4O95104 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCAF4O95104 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCAF4O95104 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.95■□□□□ 0.78
SCAF4O95104 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SCAF4O95104 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCAF4O95104 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.94■□□□□ 0.78
SCAF4O95104 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SCAF4O95104 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCAF4O95104 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAF4O95104 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.93■□□□□ 0.78
SCAF4O95104 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCAF4O95104 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCAF4O95104 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.93■□□□□ 0.78
SCAF4O95104 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAF4O95104 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.93■□□□□ 0.78
SCAF4O95104 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCAF4O95104 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCAF4O95104 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.92■□□□□ 0.78
SCAF4O95104 AC044849.2-201ENST00000606596 710 ntBASIC19.92■□□□□ 0.78
SCAF4O95104 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.92■□□□□ 0.78
SCAF4O95104 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
SCAF4O95104 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCAF4O95104 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCAF4O95104 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCAF4O95104 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCAF4O95104 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SCAF4O95104 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SCAF4O95104 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCAF4O95104 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.9■□□□□ 0.78
SCAF4O95104 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SCAF4O95104 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.9■□□□□ 0.78
SCAF4O95104 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCAF4O95104 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
SCAF4O95104 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SCAF4O95104 AC092803.2-201ENST00000564287 1899 ntBASIC19.9■□□□□ 0.78
SCAF4O95104 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCAF4O95104 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCAF4O95104 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCAF4O95104 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCAF4O95104 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCAF4O95104 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCAF4O95104 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCAF4O95104 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SCAF4O95104 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCAF4O95104 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCAF4O95104 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.87■□□□□ 0.77
SCAF4O95104 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SCAF4O95104 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.86■□□□□ 0.77
SCAF4O95104 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCAF4O95104 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCAF4O95104 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCAF4O95104 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.86■□□□□ 0.77
SCAF4O95104 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCAF4O95104 AC135983.2-203ENST00000454486 1613 ntBASIC19.85■□□□□ 0.77
SCAF4O95104 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCAF4O95104 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms