Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SPTLC1O15269 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.62■■□□□ 1.85
SPTLC1O15269 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPTLC1O15269 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.62■■□□□ 1.85
SPTLC1O15269 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPTLC1O15269 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPTLC1O15269 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPTLC1O15269 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
SPTLC1O15269 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPTLC1O15269 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPTLC1O15269 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPTLC1O15269 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.61■■□□□ 1.85
SPTLC1O15269 WHAMMP3-201ENST00000611636 1609 ntBASIC26.61■■□□□ 1.85
SPTLC1O15269 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SPTLC1O15269 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPTLC1O15269 AC142086.6-201ENST00000621154 1765 ntBASIC26.59■■□□□ 1.85
SPTLC1O15269 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SPTLC1O15269 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SPTLC1O15269 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPTLC1O15269 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC1O15269 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC1O15269 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC1O15269 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SPTLC1O15269 AC012354.3-201ENST00000623734 483 ntBASIC26.57■■□□□ 1.84
SPTLC1O15269 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC1O15269 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SPTLC1O15269 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
SPTLC1O15269 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SPTLC1O15269 U85056.1-201ENST00000616429 682 ntBASIC26.56■■□□□ 1.84
SPTLC1O15269 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.56■■□□□ 1.84
SPTLC1O15269 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SPTLC1O15269 NTF6A-201ENST00000591175 560 ntBASIC26.55■■□□□ 1.84
SPTLC1O15269 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SPTLC1O15269 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SPTLC1O15269 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.55■■□□□ 1.84
SPTLC1O15269 SMPD5-203ENST00000639008 1464 ntBASIC26.55■■□□□ 1.84
SPTLC1O15269 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPTLC1O15269 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.54■■□□□ 1.84
SPTLC1O15269 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.54■■□□□ 1.84
SPTLC1O15269 BX255925.1-201ENST00000566954 1854 ntBASIC26.54■■□□□ 1.84
SPTLC1O15269 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.54■■□□□ 1.84
SPTLC1O15269 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.54■■□□□ 1.84
SPTLC1O15269 AC025884.2-201ENST00000553429 711 ntBASIC26.54■■□□□ 1.84
SPTLC1O15269 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SPTLC1O15269 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
SPTLC1O15269 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SPTLC1O15269 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.53■■□□□ 1.84
SPTLC1O15269 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.53■■□□□ 1.84
SPTLC1O15269 AC007029.1-201ENST00000604183 313 ntBASIC26.53■■□□□ 1.84
SPTLC1O15269 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.53■■□□□ 1.84
SPTLC1O15269 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
SPTLC1O15269 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.52■■□□□ 1.84
SPTLC1O15269 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.52■■□□□ 1.84
SPTLC1O15269 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
SPTLC1O15269 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SPTLC1O15269 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SPTLC1O15269 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SPTLC1O15269 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SPTLC1O15269 AL449106.1-201ENST00000608517 1980 ntBASIC26.5■■□□□ 1.83
SPTLC1O15269 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SPTLC1O15269 AL359504.2-201ENST00000605506 1601 ntBASIC26.5■■□□□ 1.83
SPTLC1O15269 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SPTLC1O15269 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPTLC1O15269 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.49■■□□□ 1.83
SPTLC1O15269 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.49■■□□□ 1.83
SPTLC1O15269 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.48■■□□□ 1.83
SPTLC1O15269 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
SPTLC1O15269 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SPTLC1O15269 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SPTLC1O15269 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.46■■□□□ 1.83
SPTLC1O15269 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.45■■□□□ 1.83
SPTLC1O15269 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPTLC1O15269 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.45■■□□□ 1.82
SPTLC1O15269 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPTLC1O15269 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SPTLC1O15269 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SPTLC1O15269 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.44■■□□□ 1.82
SPTLC1O15269 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SPTLC1O15269 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SPTLC1O15269 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPTLC1O15269 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPTLC1O15269 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPTLC1O15269 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPTLC1O15269 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.42■■□□□ 1.82
SPTLC1O15269 AC009831.1-201ENST00000580420 1582 ntBASIC26.42■■□□□ 1.82
SPTLC1O15269 KRT18P60-201ENST00000312876 1297 ntBASIC26.42■■□□□ 1.82
SPTLC1O15269 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SPTLC1O15269 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.42■■□□□ 1.82
SPTLC1O15269 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SPTLC1O15269 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SPTLC1O15269 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SPTLC1O15269 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SPTLC1O15269 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.41■■□□□ 1.82
SPTLC1O15269 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
SPTLC1O15269 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.41■■□□□ 1.82
SPTLC1O15269 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
SPTLC1O15269 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SPTLC1O15269 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPTLC1O15269 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPTLC1O15269 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms