Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN4O14817 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN4O14817 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN4O14817 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN4O14817 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.42■□□□□ 0.86
TSPAN4O14817 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TSPAN4O14817 AL391121.1-201ENST00000607967 1349 ntBASIC20.42■□□□□ 0.86
TSPAN4O14817 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN4O14817 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN4O14817 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN4O14817 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN4O14817 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TSPAN4O14817 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.41■□□□□ 0.86
TSPAN4O14817 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN4O14817 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.41■□□□□ 0.86
TSPAN4O14817 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN4O14817 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.4■□□□□ 0.86
TSPAN4O14817 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN4O14817 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN4O14817 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.4■□□□□ 0.86
TSPAN4O14817 CAHM-201ENST00000604200 896 ntBASIC20.4■□□□□ 0.86
TSPAN4O14817 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.4■□□□□ 0.86
TSPAN4O14817 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN4O14817 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN4O14817 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN4O14817 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN4O14817 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN4O14817 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN4O14817 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN4O14817 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN4O14817 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.37■□□□□ 0.85
TSPAN4O14817 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.37■□□□□ 0.85
TSPAN4O14817 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.37■□□□□ 0.85
TSPAN4O14817 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN4O14817 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN4O14817 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN4O14817 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN4O14817 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TSPAN4O14817 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TSPAN4O14817 BX255925.1-201ENST00000566954 1854 ntBASIC20.35■□□□□ 0.85
TSPAN4O14817 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.35■□□□□ 0.85
TSPAN4O14817 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.35■□□□□ 0.85
TSPAN4O14817 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN4O14817 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN4O14817 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN4O14817 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TSPAN4O14817 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN4O14817 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN4O14817 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN4O14817 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
TSPAN4O14817 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.34■□□□□ 0.85
TSPAN4O14817 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN4O14817 AL139393.2-201ENST00000608721 2025 ntBASIC20.34■□□□□ 0.85
TSPAN4O14817 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN4O14817 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TSPAN4O14817 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.33■□□□□ 0.85
TSPAN4O14817 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.33■□□□□ 0.84
TSPAN4O14817 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN4O14817 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN4O14817 SUZ12P1-203ENST00000578195 985 ntBASIC20.32■□□□□ 0.84
TSPAN4O14817 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN4O14817 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN4O14817 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN4O14817 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN4O14817 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN4O14817 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN4O14817 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN4O14817 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN4O14817 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN4O14817 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TSPAN4O14817 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN4O14817 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN4O14817 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN4O14817 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN4O14817 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN4O14817 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN4O14817 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN4O14817 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN4O14817 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.28■□□□□ 0.84
TSPAN4O14817 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN4O14817 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN4O14817 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TSPAN4O14817 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN4O14817 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN4O14817 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.27■□□□□ 0.84
TSPAN4O14817 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN4O14817 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN4O14817 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.27■□□□□ 0.84
TSPAN4O14817 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN4O14817 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
TSPAN4O14817 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN4O14817 AC145676.1-201ENST00000514988 2004 ntBASIC20.26■□□□□ 0.83
TSPAN4O14817 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN4O14817 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN4O14817 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.25■□□□□ 0.83
TSPAN4O14817 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN4O14817 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TSPAN4O14817 AL024507.2-201ENST00000606070 2574 ntBASIC20.25■□□□□ 0.83
TSPAN4O14817 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN4O14817 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms