Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK2O00526 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UPK2O00526 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPK2O00526 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.77■□□□□ 0.76
UPK2O00526 DUSP8P4-201ENST00000399538 1761 ntBASIC19.77■□□□□ 0.76
UPK2O00526 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UPK2O00526 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK2O00526 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK2O00526 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
UPK2O00526 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UPK2O00526 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK2O00526 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
UPK2O00526 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK2O00526 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L13-201ENST00000554103 1267 ntBASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L15-201ENST00000611059 1267 ntBASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L23-201ENST00000615195 1269 ntBASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L24-201ENST00000617576 1269 ntBASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L22-201ENST00000618238 1269 ntBASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L20-201ENST00000619712 1269 ntBASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L21-201ENST00000622058 1269 ntBASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L10-201ENST00000622460 1267 ntBASIC19.75■□□□□ 0.75
UPK2O00526 DUX4L25-201ENST00000624915 1269 ntBASIC19.75■□□□□ 0.75
UPK2O00526 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK2O00526 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK2O00526 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK2O00526 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK2O00526 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPK2O00526 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.74■□□□□ 0.75
UPK2O00526 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
UPK2O00526 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UPK2O00526 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.74■□□□□ 0.75
UPK2O00526 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPK2O00526 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
UPK2O00526 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.73■□□□□ 0.75
UPK2O00526 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK2O00526 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.73■□□□□ 0.75
UPK2O00526 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.73■□□□□ 0.75
UPK2O00526 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK2O00526 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK2O00526 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK2O00526 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
UPK2O00526 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK2O00526 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPK2O00526 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPK2O00526 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.72■□□□□ 0.75
UPK2O00526 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK2O00526 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK2O00526 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK2O00526 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK2O00526 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK2O00526 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK2O00526 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK2O00526 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK2O00526 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
UPK2O00526 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK2O00526 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.71■□□□□ 0.75
UPK2O00526 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
UPK2O00526 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK2O00526 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK2O00526 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK2O00526 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
UPK2O00526 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 AC008813.1-201ENST00000536597 885 ntBASIC19.7■□□□□ 0.74
UPK2O00526 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.7■□□□□ 0.74
UPK2O00526 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK2O00526 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK2O00526 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK2O00526 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK2O00526 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK2O00526 DUX4L11-201ENST00000611504 1267 ntBASIC19.69■□□□□ 0.74
UPK2O00526 DUX4L12-201ENST00000614593 1267 ntBASIC19.69■□□□□ 0.74
UPK2O00526 DUX4L14-201ENST00000621227 1267 ntBASIC19.69■□□□□ 0.74
UPK2O00526 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK2O00526 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK2O00526 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK2O00526 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK2O00526 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UPK2O00526 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPK2O00526 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK2O00526 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPK2O00526 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK2O00526 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK2O00526 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.68■□□□□ 0.74
UPK2O00526 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPK2O00526 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
UPK2O00526 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UPK2O00526 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
UPK2O00526 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK2O00526 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms