Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDUFA4O00483 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NDUFA4O00483 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.01■□□□□ 0.63
NDUFA4O00483 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
NDUFA4O00483 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.01■□□□□ 0.63
NDUFA4O00483 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.01■□□□□ 0.63
NDUFA4O00483 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDUFA4O00483 MIR639-201ENST00000384974 98 ntBASIC19■□□□□ 0.63
NDUFA4O00483 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDUFA4O00483 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDUFA4O00483 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NDUFA4O00483 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDUFA4O00483 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDUFA4O00483 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NDUFA4O00483 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDUFA4O00483 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDUFA4O00483 AC126177.7-201ENST00000547904 679 ntBASIC18.99■□□□□ 0.63
NDUFA4O00483 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDUFA4O00483 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDUFA4O00483 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NDUFA4O00483 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDUFA4O00483 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDUFA4O00483 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NDUFA4O00483 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
NDUFA4O00483 AP004609.3-201ENST00000610705 1884 ntBASIC18.98■□□□□ 0.63
NDUFA4O00483 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDUFA4O00483 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDUFA4O00483 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDUFA4O00483 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDUFA4O00483 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDUFA4O00483 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.97■□□□□ 0.63
NDUFA4O00483 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.97■□□□□ 0.63
NDUFA4O00483 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.97■□□□□ 0.63
NDUFA4O00483 AC142472.1-201ENST00000612013 1741 ntBASIC18.97■□□□□ 0.63
NDUFA4O00483 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
NDUFA4O00483 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFA4O00483 AL359258.2-201ENST00000564063 1566 ntBASIC18.96■□□□□ 0.63
NDUFA4O00483 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFA4O00483 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.95■□□□□ 0.62
NDUFA4O00483 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFA4O00483 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NDUFA4O00483 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFA4O00483 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.95■□□□□ 0.62
NDUFA4O00483 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFA4O00483 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFA4O00483 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFA4O00483 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.93■□□□□ 0.62
NDUFA4O00483 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFA4O00483 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFA4O00483 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NDUFA4O00483 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.93■□□□□ 0.62
NDUFA4O00483 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.93■□□□□ 0.62
NDUFA4O00483 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFA4O00483 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFA4O00483 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NDUFA4O00483 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.92■□□□□ 0.62
NDUFA4O00483 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.92■□□□□ 0.62
NDUFA4O00483 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDUFA4O00483 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDUFA4O00483 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NDUFA4O00483 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.91■□□□□ 0.62
NDUFA4O00483 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDUFA4O00483 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NDUFA4O00483 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NDUFA4O00483 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDUFA4O00483 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFA4O00483 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFA4O00483 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFA4O00483 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFA4O00483 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NDUFA4O00483 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.89■□□□□ 0.61
NDUFA4O00483 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDUFA4O00483 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.89■□□□□ 0.61
NDUFA4O00483 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.89■□□□□ 0.61
NDUFA4O00483 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDUFA4O00483 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.89■□□□□ 0.61
NDUFA4O00483 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.88■□□□□ 0.61
NDUFA4O00483 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.88■□□□□ 0.61
NDUFA4O00483 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.88■□□□□ 0.61
NDUFA4O00483 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.88■□□□□ 0.61
NDUFA4O00483 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFA4O00483 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.87■□□□□ 0.61
NDUFA4O00483 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFA4O00483 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFA4O00483 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFA4O00483 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFA4O00483 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms