Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
IGKV3D-20A0A0C4DH25 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IGKV3D-20A0A0C4DH25 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.27■□□□□ 0.52
IGKV3D-20A0A0C4DH25 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.27■□□□□ 0.52
IGKV3D-20A0A0C4DH25 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.27■□□□□ 0.52
IGKV3D-20A0A0C4DH25 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IGKV3D-20A0A0C4DH25 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
IGKV3D-20A0A0C4DH25 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.27■□□□□ 0.51
IGKV3D-20A0A0C4DH25 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.26■□□□□ 0.51
IGKV3D-20A0A0C4DH25 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IGKV3D-20A0A0C4DH25 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.26■□□□□ 0.51
IGKV3D-20A0A0C4DH25 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IGKV3D-20A0A0C4DH25 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IGKV3D-20A0A0C4DH25 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.26■□□□□ 0.51
IGKV3D-20A0A0C4DH25 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV3D-20A0A0C4DH25 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV3D-20A0A0C4DH25 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV3D-20A0A0C4DH25 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV3D-20A0A0C4DH25 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV3D-20A0A0C4DH25 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV3D-20A0A0C4DH25 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV3D-20A0A0C4DH25 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.24■□□□□ 0.51
IGKV3D-20A0A0C4DH25 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV3D-20A0A0C4DH25 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV3D-20A0A0C4DH25 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV3D-20A0A0C4DH25 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV3D-20A0A0C4DH25 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
IGKV3D-20A0A0C4DH25 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.22■□□□□ 0.51
IGKV3D-20A0A0C4DH25 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
IGKV3D-20A0A0C4DH25 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV3D-20A0A0C4DH25 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV3D-20A0A0C4DH25 AC142472.1-201ENST00000612013 1741 ntBASIC18.21■□□□□ 0.51
IGKV3D-20A0A0C4DH25 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV3D-20A0A0C4DH25 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
IGKV3D-20A0A0C4DH25 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IGKV3D-20A0A0C4DH25 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV3D-20A0A0C4DH25 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3D-20A0A0C4DH25 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
IGKV3D-20A0A0C4DH25 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
IGKV3D-20A0A0C4DH25 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.2■□□□□ 0.5
IGKV3D-20A0A0C4DH25 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3D-20A0A0C4DH25 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3D-20A0A0C4DH25 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3D-20A0A0C4DH25 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3D-20A0A0C4DH25 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3D-20A0A0C4DH25 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3D-20A0A0C4DH25 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.19■□□□□ 0.5
IGKV3D-20A0A0C4DH25 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.19■□□□□ 0.5
IGKV3D-20A0A0C4DH25 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.19■□□□□ 0.5
IGKV3D-20A0A0C4DH25 AC110285.7-201ENST00000624417 1536 ntBASIC18.18■□□□□ 0.5
IGKV3D-20A0A0C4DH25 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3D-20A0A0C4DH25 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3D-20A0A0C4DH25 MIR3665-201ENST00000578708 105 ntBASIC18.18■□□□□ 0.5
IGKV3D-20A0A0C4DH25 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3D-20A0A0C4DH25 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3D-20A0A0C4DH25 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV3D-20A0A0C4DH25 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV3D-20A0A0C4DH25 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.16■□□□□ 0.5
IGKV3D-20A0A0C4DH25 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV3D-20A0A0C4DH25 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
IGKV3D-20A0A0C4DH25 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV3D-20A0A0C4DH25 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
IGKV3D-20A0A0C4DH25 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV3D-20A0A0C4DH25 WHAMMP3-201ENST00000611636 1609 ntBASIC18.15■□□□□ 0.5
IGKV3D-20A0A0C4DH25 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
IGKV3D-20A0A0C4DH25 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.15■□□□□ 0.5
IGKV3D-20A0A0C4DH25 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
IGKV3D-20A0A0C4DH25 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
IGKV3D-20A0A0C4DH25 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
IGKV3D-20A0A0C4DH25 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.14■□□□□ 0.49
IGKV3D-20A0A0C4DH25 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV3D-20A0A0C4DH25 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV3D-20A0A0C4DH25 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms