Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV2A0A0B4J234 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRAV2A0A0B4J234 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV2A0A0B4J234 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV2A0A0B4J234 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV2A0A0B4J234 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV2A0A0B4J234 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 MIR4449-201ENST00000578365 66 ntBASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV2A0A0B4J234 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV2A0A0B4J234 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAV2A0A0B4J234 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV2A0A0B4J234 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV2A0A0B4J234 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV2A0A0B4J234 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV2A0A0B4J234 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV2A0A0B4J234 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV2A0A0B4J234 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV2A0A0B4J234 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAV2A0A0B4J234 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV2A0A0B4J234 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV2A0A0B4J234 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV2A0A0B4J234 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV2A0A0B4J234 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV2A0A0B4J234 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV2A0A0B4J234 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV2A0A0B4J234 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV2A0A0B4J234 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAV2A0A0B4J234 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV2A0A0B4J234 AL449106.1-201ENST00000608517 1980 ntBASIC18.55■□□□□ 0.56
TRAV2A0A0B4J234 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV2A0A0B4J234 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 AL359258.2-201ENST00000564063 1566 ntBASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV2A0A0B4J234 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV2A0A0B4J234 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV2A0A0B4J234 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV2A0A0B4J234 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRAV2A0A0B4J234 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV2A0A0B4J234 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV2A0A0B4J234 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAV2A0A0B4J234 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV2A0A0B4J234 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV2A0A0B4J234 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV2A0A0B4J234 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV2A0A0B4J234 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV2A0A0B4J234 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV2A0A0B4J234 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV2A0A0B4J234 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV2A0A0B4J234 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 AC142472.1-201ENST00000612013 1741 ntBASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV2A0A0B4J234 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV2A0A0B4J234 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV2A0A0B4J234 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV2A0A0B4J234 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV2A0A0B4J234 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV2A0A0B4J234 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV2A0A0B4J234 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV2A0A0B4J234 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV2A0A0B4J234 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV2A0A0B4J234 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV2A0A0B4J234 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRAV2A0A0B4J234 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV2A0A0B4J234 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV2A0A0B4J234 AL121749.1-202ENST00000609313 2153 ntBASIC18.48■□□□□ 0.55
TRAV2A0A0B4J234 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV2A0A0B4J234 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV2A0A0B4J234 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV2A0A0B4J234 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV2A0A0B4J234 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV2A0A0B4J234 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV2A0A0B4J234 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV2A0A0B4J234 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV2A0A0B4J234 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV2A0A0B4J234 AC060814.1-201ENST00000554326 538 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms