Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.98□□□□□ -1.451e-10■□□□□ 11.2
LARP4Q71RC2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.69e-19■□□□□ 11.2
LARP4Q71RC2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.69e-19■□□□□ 11.2
LARP4Q71RC2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.029e-19■□□□□ 11.2
LARP4Q71RC2 GORASP2-209ENST00000493692 951 ntTSL 511.89□□□□□ -0.511e-8■□□□□ 11.2
LARP4Q71RC2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.247e-7■□□□□ 11.1
LARP4Q71RC2 LRRC59-202ENST00000503118 438 ntTSL 57.57□□□□□ -1.27e-7■□□□□ 11.1
LARP4Q71RC2 FUCA2-203ENST00000451668 737 ntTSL 28.94□□□□□ -0.985e-8■□□□□ 11.1
LARP4Q71RC2 YIPF3-211ENST00000503147 652 ntTSL 211.49□□□□□ -0.577e-15■□□□□ 11.1
LARP4Q71RC2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.213e-7■□□□□ 11.1
LARP4Q71RC2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.063e-7■□□□□ 11.1
LARP4Q71RC2 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC10.74□□□□□ -0.693e-7■□□□□ 11.1
LARP4Q71RC2 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.033e-7■□□□□ 11.1
LARP4Q71RC2 DYNLL1-210ENST00000552316 670 nt5.06□□□□□ -1.63e-7■□□□□ 11.1
LARP4Q71RC2 SLC16A3-216ENST00000583025 955 ntTSL 217.66■□□□□ 0.422e-8■□□□□ 11.1
LARP4Q71RC2 APRT-205ENST00000564858 584 ntTSL 219.41■□□□□ 0.71e-11■□□□□ 11.1
LARP4Q71RC2 TMEM161B-AS1-203ENST00000501869 684 ntTSL 1 (best)16.76■□□□□ 0.275e-7■□□□□ 11.1
LARP4Q71RC2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.49□□□□□ -0.095e-7■□□□□ 11.1
LARP4Q71RC2 TMEM161B-AS1-206ENST00000504922 585 ntTSL 214.12□□□□□ -0.155e-7■□□□□ 11.1
LARP4Q71RC2 TMEM161B-AS1-210ENST00000510087 590 ntTSL 312.84□□□□□ -0.355e-7■□□□□ 11.1
LARP4Q71RC2 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC9.06□□□□□ -0.965e-7■□□□□ 11.1
LARP4Q71RC2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.44□□□□□ -1.545e-7■□□□□ 11.1
LARP4Q71RC2 TMEM161B-AS1-211ENST00000512724 570 ntTSL 34.76□□□□□ -1.655e-7■□□□□ 11.1
LARP4Q71RC2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.562e-7■□□□□ 11.1
LARP4Q71RC2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.522e-7■□□□□ 11.1
LARP4Q71RC2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.29□□□□□ -0.282e-7■□□□□ 11.1
LARP4Q71RC2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.76□□□□□ -0.372e-7■□□□□ 11.1
LARP4Q71RC2 CIDEB-206ENST00000556756 248 ntTSL 59.03□□□□□ -0.962e-7■□□□□ 11.1
LARP4Q71RC2 GNB2-212ENST00000470354 902 ntTSL 518.18■□□□□ 0.53e-12■□□□□ 11.1
LARP4Q71RC2 MLXIPL-209ENST00000467221 774 ntTSL 510.53□□□□□ -0.728e-20■□□□□ 11.1
LARP4Q71RC2 MGST3-209ENST00000477450 364 ntTSL 31.87□□□□□ -2.114e-6■□□□□ 11.1
LARP4Q71RC2 RPL30-207ENST00000520998 747 ntTSL 213.15□□□□□ -0.31e-17■□□□□ 11.1
LARP4Q71RC2 RPL30-208ENST00000521112 573 ntTSL 1 (best)12.7□□□□□ -0.381e-17■□□□□ 11.1
LARP4Q71RC2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.32□□□□□ -0.125e-9■□□□□ 11.1
LARP4Q71RC2 HPD-201ENST00000289004 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.545e-9■□□□□ 11.1
LARP4Q71RC2 RPL9-207ENST00000506581 371 ntTSL 57.15□□□□□ -1.262e-10■□□□□ 11.1
LARP4Q71RC2 RPL9-210ENST00000511643 618 ntTSL 24.84□□□□□ -1.632e-10■□□□□ 11.1
LARP4Q71RC2 RPL36-206ENST00000582380 542 ntTSL 516.67■□□□□ 0.269e-27■□□□□ 11.1
LARP4Q71RC2 NKD1-202ENST00000564336 477 ntTSL 320.53■□□□□ 0.883e-6■□□□□ 11.1
LARP4Q71RC2 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.953e-6■□□□□ 11.1
LARP4Q71RC2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.84■□□□□ 0.454e-8■□□□□ 11.1
LARP4Q71RC2 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.394e-8■□□□□ 11.1
LARP4Q71RC2 ENSA-209ENST00000369016 923 ntTSL 5 BASIC7.81□□□□□ -1.164e-8■□□□□ 11.1
LARP4Q71RC2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.23■■□□□ 1.631e-6■□□□□ 11.1
LARP4Q71RC2 DDX54-207ENST00000550016 594 ntTSL 517.95■□□□□ 0.461e-6■□□□□ 11.1
LARP4Q71RC2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.28■□□□□ 0.361e-13■□□□□ 11.1
LARP4Q71RC2 TPR-205ENST00000474852 2757 ntTSL 1 (best)16.38■□□□□ 0.211e-13■□□□□ 11.1
LARP4Q71RC2 MOB1B-205ENST00000511449 627 ntTSL 315.38■□□□□ 0.051e-6■□□□□ 11.1
LARP4Q71RC2 DDX54-204ENST00000546898 479 ntTSL 314.53□□□□□ -0.081e-6■□□□□ 11.1
LARP4Q71RC2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.111e-6■□□□□ 11.1
LARP4Q71RC2 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.311e-6■□□□□ 11.1
LARP4Q71RC2 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.331e-6■□□□□ 11.1
LARP4Q71RC2 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.53□□□□□ -0.41e-6■□□□□ 11.1
LARP4Q71RC2 RAD50-209ENST00000533482 4373 ntTSL 1 (best)12.03□□□□□ -0.481e-6■□□□□ 11.1
LARP4Q71RC2 AC116366.3-201ENST00000638452 7893 ntAPPRIS ALT2 TSL 511.69□□□□□ -0.541e-6■□□□□ 11.1
LARP4Q71RC2 ZNF330-203ENST00000506302 1180 ntTSL 211.31□□□□□ -0.61e-6■□□□□ 11.1
LARP4Q71RC2 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.691e-6■□□□□ 11.1
LARP4Q71RC2 UQCRC2-201ENST00000268379 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.721e-6■□□□□ 11.1
LARP4Q71RC2 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.721e-6■□□□□ 11.1
LARP4Q71RC2 UHMK1-201ENST00000282169 3345 ntTSL 29.73□□□□□ -0.851e-6■□□□□ 11.1
LARP4Q71RC2 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.951e-6■□□□□ 11.1
LARP4Q71RC2 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.981e-6■□□□□ 11.1
LARP4Q71RC2 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.041e-6■□□□□ 11.1
LARP4Q71RC2 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.3□□□□□ -1.081e-6■□□□□ 11.1
LARP4Q71RC2 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.091e-6■□□□□ 11.1
LARP4Q71RC2 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.11e-6■□□□□ 11.1
LARP4Q71RC2 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.151e-6■□□□□ 11.1
LARP4Q71RC2 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.151e-6■□□□□ 11.1
LARP4Q71RC2 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.151e-6■□□□□ 11.1
LARP4Q71RC2 AC116366.3-203ENST00000639899 8173 ntTSL 57.74□□□□□ -1.171e-6■□□□□ 11.1
LARP4Q71RC2 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.181e-6■□□□□ 11.1
LARP4Q71RC2 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.16□□□□□ -1.261e-6■□□□□ 11.1
LARP4Q71RC2 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.31e-6■□□□□ 11.1
LARP4Q71RC2 CD46-212ENST00000469535 7826 ntTSL 1 (best)6.76□□□□□ -1.331e-6■□□□□ 11.1
LARP4Q71RC2 KNL1-213ENST00000614337 3211 ntTSL 1 (best)6.7□□□□□ -1.341e-6■□□□□ 11.1
LARP4Q71RC2 AC116366.3-204ENST00000638504 7262 ntAPPRIS P5 TSL 56.65□□□□□ -1.341e-6■□□□□ 11.1
LARP4Q71RC2 UQCRC2-203ENST00000561798 699 ntTSL 26.54□□□□□ -1.361e-6■□□□□ 11.1
LARP4Q71RC2 AC116366.3-202ENST00000638568 7956 ntAPPRIS ALT2 TSL 56.07□□□□□ -1.441e-6■□□□□ 11.1
LARP4Q71RC2 UQCRC2-205ENST00000563898 1406 ntTSL 55.91□□□□□ -1.461e-6■□□□□ 11.1
LARP4Q71RC2 CD46-211ENST00000464082 567 ntTSL 25.75□□□□□ -1.491e-6■□□□□ 11.1
LARP4Q71RC2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.511e-6■□□□□ 11.1
LARP4Q71RC2 RAD50-203ENST00000423956 2915 ntTSL 53.55□□□□□ -1.841e-6■□□□□ 11.1
LARP4Q71RC2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.021e-6■□□□□ 11.1
LARP4Q71RC2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.523e-10■□□□□ 11.1
LARP4Q71RC2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.393e-10■□□□□ 11.1
LARP4Q71RC2 C11orf98-203ENST00000532786 774 ntTSL 214.63□□□□□ -0.073e-10■□□□□ 11.1
LARP4Q71RC2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.193e-10■□□□□ 11.1
LARP4Q71RC2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.283e-10■□□□□ 11.1
LARP4Q71RC2 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.553e-10■□□□□ 11.1
LARP4Q71RC2 SPP1-207ENST00000508233 825 ntTSL 27.33□□□□□ -1.243e-10■□□□□ 11.1
LARP4Q71RC2 MDH1-202ENST00000409476 808 ntTSL 5 BASIC10.03□□□□□ -0.82e-9■□□□□ 11.1
LARP4Q71RC2 MDH1-203ENST00000409908 700 ntTSL 3 BASIC10.03□□□□□ -0.82e-9■□□□□ 11.1
LARP4Q71RC2 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.832e-9■□□□□ 11.1
LARP4Q71RC2 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC9.72□□□□□ -0.852e-9■□□□□ 11.1
LARP4Q71RC2 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC9.44□□□□□ -0.92e-9■□□□□ 11.1
LARP4Q71RC2 MDH1-214ENST00000495083 552 ntTSL 26.04□□□□□ -1.442e-9■□□□□ 11.1
LARP4Q71RC2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.63e-11■□□□□ 11.1
LARP4Q71RC2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.813e-11■□□□□ 11.1
LARP4Q71RC2 SLC16A3-213ENST00000582715 279 ntTSL 513.79□□□□□ -0.23e-11■□□□□ 11.1
LARP4Q71RC2 HINT1-202ENST00000504202 619 ntTSL 54.27□□□□□ -1.732e-10■□□□□ 11.1
Retrieved 100 of 15,922 protein–RNA pairs in 245.9 ms