RNA–Protein interactions for RNA: ENST00000495083.1

MDH1-214, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-214ENST00000495083 AEBP2Q6ZN18 517 aaPredicted RBP31.46■■■□□ 2.63
MDH1-214ENST00000495083 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
MDH1-214ENST00000495083 SENP3Q9H4L4 574 aaPredicted RBP26.78■■□□□ 1.88
MDH1-214ENST00000495083 PHF23Q9BUL5 403 aaPredicted RBP26.44■■□□□ 1.82
MDH1-214ENST00000495083 FOXD1Q16676 465 aa25.05■■□□□ 1.6
MDH1-214ENST00000495083 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
MDH1-214ENST00000495083 MSH5O43196 834 aa23.46■■□□□ 1.35
MDH1-214ENST00000495083 POTEDQ86YR6 584 aa23.38■■□□□ 1.33
MDH1-214ENST00000495083 PIAS4Q8N2W9 510 aaPredicted RBP23.29■■□□□ 1.32
MDH1-214ENST00000495083 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
MDH1-214ENST00000495083 ADRA2BP18089 450 aa23.16■■□□□ 1.3
MDH1-214ENST00000495083 MAPK8IP2Q13387 824 aaPredicted RBP21.37■■□□□ 1.01
MDH1-214ENST00000495083 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
MDH1-214ENST00000495083 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
MDH1-214ENST00000495083 PPP4R3CPQ6ZMV5 832 aa20.59■□□□□ 0.89
MDH1-214ENST00000495083 HOXD11P31277 338 aaPredicted RBP20.37■□□□□ 0.85
MDH1-214ENST00000495083 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
MDH1-214ENST00000495083 CACNB1Q02641 598 aaPredicted RBP20.29■□□□□ 0.84
MDH1-214ENST00000495083 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
MDH1-214ENST00000495083 RNF216Q9NWF9 866 aaPredicted RBP20.12■□□□□ 0.81
MDH1-214ENST00000495083 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
MDH1-214ENST00000495083 C1QBPQ07021 282 aaKnown RBP19.71■□□□□ 0.75
MDH1-214ENST00000495083 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
MDH1-214ENST00000495083 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
MDH1-214ENST00000495083 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
MDH1-214ENST00000495083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.694e-15■□□□□ 8
MDH1-214ENST00000495083 U3KPZ7 1027 aaPredicted RBP18.97■□□□□ 0.63
MDH1-214ENST00000495083 KCNA4P22459 653 aa18.87■□□□□ 0.61
MDH1-214ENST00000495083 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
MDH1-214ENST00000495083 DSG3P32926 999 aa18.7■□□□□ 0.58
MDH1-214ENST00000495083 CAPN15O75808 1086 aa18.69■□□□□ 0.58
MDH1-214ENST00000495083 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
MDH1-214ENST00000495083 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
MDH1-214ENST00000495083 APLP2Q06481 763 aa18.29■□□□□ 0.52
MDH1-214ENST00000495083 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
MDH1-214ENST00000495083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
MDH1-214ENST00000495083 ABCB7O75027 752 aa18.26■□□□□ 0.51
MDH1-214ENST00000495083 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
MDH1-214ENST00000495083 POTEHQ6S545 545 aa18.25■□□□□ 0.51
MDH1-214ENST00000495083 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
MDH1-214ENST00000495083 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
MDH1-214ENST00000495083 POLA2Q14181 598 aa17.82■□□□□ 0.44
MDH1-214ENST00000495083 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
MDH1-214ENST00000495083 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
MDH1-214ENST00000495083 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.41
MDH1-214ENST00000495083 ATF5Q9Y2D1 282 aaPredicted RBP17.64■□□□□ 0.41
MDH1-214ENST00000495083 CHRDL2Q6WN34 429 aa17.53■□□□□ 0.4
MDH1-214ENST00000495083 ZBTB22O15209 634 aa17.39■□□□□ 0.37
MDH1-214ENST00000495083 ZBTB12Q9Y330 459 aaPredicted RBP17.36■□□□□ 0.37
MDH1-214ENST00000495083 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
MDH1-214ENST00000495083 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
MDH1-214ENST00000495083 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
MDH1-214ENST00000495083 ATXN8OSP0DMR3 200 aa17.12■□□□□ 0.33
MDH1-214ENST00000495083 PIP4P2Q8N4L2 257 aa17.08■□□□□ 0.32
MDH1-214ENST00000495083 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
MDH1-214ENST00000495083 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
MDH1-214ENST00000495083 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
MDH1-214ENST00000495083 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
MDH1-214ENST00000495083 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
MDH1-214ENST00000495083 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
MDH1-214ENST00000495083 FBLN2P98095 1184 aa16.84■□□□□ 0.29
MDH1-214ENST00000495083 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
MDH1-214ENST00000495083 HAX1O00165 279 aa16.79■□□□□ 0.28
MDH1-214ENST00000495083 EVX2Q03828 476 aa16.67■□□□□ 0.26
MDH1-214ENST00000495083 SSUH2Q9Y2M2 353 aa16.65■□□□□ 0.26
MDH1-214ENST00000495083 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
MDH1-214ENST00000495083 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
MDH1-214ENST00000495083 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
MDH1-214ENST00000495083 PRKAR2AP13861 404 aaKnown RBP16.57■□□□□ 0.24
MDH1-214ENST00000495083 C19orf67A6NJJ6 358 aa16.41■□□□□ 0.22
MDH1-214ENST00000495083 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
MDH1-214ENST00000495083 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
MDH1-214ENST00000495083 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
MDH1-214ENST00000495083 PRR29P0C7W0 189 aa16.29■□□□□ 0.2
MDH1-214ENST00000495083 GABBR2O75899 941 aa16.23■□□□□ 0.19
MDH1-214ENST00000495083 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
MDH1-214ENST00000495083 CD44P16070 742 aaKnown RBP16.01■□□□□ 0.15
MDH1-214ENST00000495083 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
MDH1-214ENST00000495083 LHX8Q68G74 356 aa15.93■□□□□ 0.14
MDH1-214ENST00000495083 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
MDH1-214ENST00000495083 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
MDH1-214ENST00000495083 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
MDH1-214ENST00000495083 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
MDH1-214ENST00000495083 CLCN6P51797 869 aa15.82■□□□□ 0.12
MDH1-214ENST00000495083 ZNF579Q8NAF0 562 aaKnown RBP15.77■□□□□ 0.12
MDH1-214ENST00000495083 ZRANB1Q9UGI0 708 aa15.75■□□□□ 0.11
MDH1-214ENST00000495083 DCBLD2Q96PD2 775 aa15.67■□□□□ 0.1
MDH1-214ENST00000495083 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
MDH1-214ENST00000495083 MNX1P50219 401 aaPredicted RBP15.61■□□□□ 0.09
MDH1-214ENST00000495083 PHF12Q96QT6 1004 aa15.54■□□□□ 0.08
MDH1-214ENST00000495083 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
MDH1-214ENST00000495083 PAK3O75914 559 aaPredicted RBP15.5■□□□□ 0.07
MDH1-214ENST00000495083 PROM2Q8N271 834 aa15.46■□□□□ 0.07
MDH1-214ENST00000495083 POTEB2H3BUK9 544 aa15.4■□□□□ 0.06
MDH1-214ENST00000495083 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
MDH1-214ENST00000495083 OTUD5Q96G74 571 aa15.36■□□□□ 0.05
MDH1-214ENST00000495083 MS4A3Q96HJ5 214 aa15.32■□□□□ 0.04
MDH1-214ENST00000495083 ASTLQ6HA08 431 aaPredicted RBP15.27■□□□□ 0.04
MDH1-214ENST00000495083 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
MDH1-214ENST00000495083 ATMINO43313 823 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms