RNA–Protein interactions for RNA: ENST00000638452.1

AC116366.3-201, humanhuman

APPRIS ALT2 TSL 5

Gene AC116366.3, Length 7,893 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116366.3-201ENST00000638452 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
AC116366.3-201ENST00000638452 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
AC116366.3-201ENST00000638452 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
AC116366.3-201ENST00000638452 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
AC116366.3-201ENST00000638452 APLP2Q06481 763 aa19.44■□□□□ 0.7
AC116366.3-201ENST00000638452 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
AC116366.3-201ENST00000638452 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
AC116366.3-201ENST00000638452 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
AC116366.3-201ENST00000638452 ATP1B4Q9UN42 357 aaPredicted RBP19.01■□□□□ 0.63
AC116366.3-201ENST00000638452 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
AC116366.3-201ENST00000638452 TTBK1Q5TCY1 1321 aaPredicted RBP18.88■□□□□ 0.61
AC116366.3-201ENST00000638452 MYT1LQ9UL68 1186 aa18.72■□□□□ 0.59
AC116366.3-201ENST00000638452 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
AC116366.3-201ENST00000638452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
AC116366.3-201ENST00000638452 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
AC116366.3-201ENST00000638452 ERICH6Q7L0X2 663 aa18.36■□□□□ 0.53
AC116366.3-201ENST00000638452 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
AC116366.3-201ENST00000638452 PCGF6Q9BYE7 350 aa18.34■□□□□ 0.53
AC116366.3-201ENST00000638452 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
AC116366.3-201ENST00000638452 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
AC116366.3-201ENST00000638452 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
AC116366.3-201ENST00000638452 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
AC116366.3-201ENST00000638452 NEFLP07196 543 aa18.02■□□□□ 0.47
AC116366.3-201ENST00000638452 CENPBP07199 599 aaPredicted RBP17.94■□□□□ 0.46
AC116366.3-201ENST00000638452 ITGAEP38570 1179 aa17.91■□□□□ 0.46
AC116366.3-201ENST00000638452 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
AC116366.3-201ENST00000638452 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
AC116366.3-201ENST00000638452 DAXXQ9UER7 740 aaPredicted RBP17.8■□□□□ 0.44
AC116366.3-201ENST00000638452 PPARGC1BQ86YN6 1023 aaKnown RBP17.74■□□□□ 0.43
AC116366.3-201ENST00000638452 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
AC116366.3-201ENST00000638452 BCANQ96GW7 911 aa17.7■□□□□ 0.42
AC116366.3-201ENST00000638452 FBLN2P98095 1184 aa17.7■□□□□ 0.42
AC116366.3-201ENST00000638452 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
AC116366.3-201ENST00000638452 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
AC116366.3-201ENST00000638452 ESF1Q9H501 851 aaKnown RBP17.49■□□□□ 0.39
AC116366.3-201ENST00000638452 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
AC116366.3-201ENST00000638452 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
AC116366.3-201ENST00000638452 TRIM52Q96A61 297 aa17.46■□□□□ 0.39
AC116366.3-201ENST00000638452 ABCC9O60706 1549 aa17.43■□□□□ 0.38
AC116366.3-201ENST00000638452 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
AC116366.3-201ENST00000638452 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
AC116366.3-201ENST00000638452 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
AC116366.3-201ENST00000638452 MYT1Q01538 1121 aa17.29■□□□□ 0.36
AC116366.3-201ENST00000638452 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
AC116366.3-201ENST00000638452 NEFMP07197 916 aa17.29■□□□□ 0.36
AC116366.3-201ENST00000638452 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
AC116366.3-201ENST00000638452 BCL11AQ9H165 835 aa17.24■□□□□ 0.35
AC116366.3-201ENST00000638452 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
AC116366.3-201ENST00000638452 ARID3CA6NKF2 412 aa17.17■□□□□ 0.34
AC116366.3-201ENST00000638452 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.34
AC116366.3-201ENST00000638452 NEUROD1Q13562 356 aa17.13■□□□□ 0.33
AC116366.3-201ENST00000638452 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
AC116366.3-201ENST00000638452 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
AC116366.3-201ENST00000638452 CANXP27824 592 aaKnown RBP17.09■□□□□ 0.33
AC116366.3-201ENST00000638452 CHGAP10645 457 aaKnown RBP17.06■□□□□ 0.32
AC116366.3-201ENST00000638452 A0A0G2JS52 829 aa17.06■□□□□ 0.32
AC116366.3-201ENST00000638452 P3H3Q8IVL6 736 aa16.98■□□□□ 0.31
AC116366.3-201ENST00000638452 CDK11AQ9UQ88 783 aaPredicted RBP16.97■□□□□ 0.31
AC116366.3-201ENST00000638452 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
AC116366.3-201ENST00000638452 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
AC116366.3-201ENST00000638452 NPM2Q86SE8 214 aaKnown RBP16.83■□□□□ 0.29
AC116366.3-201ENST00000638452 C14orf37Q86TY3 774 aa16.83■□□□□ 0.29
AC116366.3-201ENST00000638452 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
AC116366.3-201ENST00000638452 ANP32CO43423 234 aa16.81■□□□□ 0.28
AC116366.3-201ENST00000638452 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
AC116366.3-201ENST00000638452 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
AC116366.3-201ENST00000638452 HRCP23327 699 aa16.76■□□□□ 0.27
AC116366.3-201ENST00000638452 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
AC116366.3-201ENST00000638452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.275e-9■■■■□ 19.3
AC116366.3-201ENST00000638452 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
AC116366.3-201ENST00000638452 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
AC116366.3-201ENST00000638452 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
AC116366.3-201ENST00000638452 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
AC116366.3-201ENST00000638452 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
AC116366.3-201ENST00000638452 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
AC116366.3-201ENST00000638452 ARXQ96QS3 562 aa16.56■□□□□ 0.24
AC116366.3-201ENST00000638452 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
AC116366.3-201ENST00000638452 NPHP1O15259 732 aa16.53■□□□□ 0.24
AC116366.3-201ENST00000638452 KCNH8Q96L42 1107 aa16.52■□□□□ 0.24
AC116366.3-201ENST00000638452 TSPY4P0CV99 314 aa16.52■□□□□ 0.23
AC116366.3-201ENST00000638452 TSPY10P0CW01 314 aa16.52■□□□□ 0.23
AC116366.3-201ENST00000638452 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
AC116366.3-201ENST00000638452 LMOD2Q6P5Q4 547 aa16.44■□□□□ 0.22
AC116366.3-201ENST00000638452 CHIC2Q9UKJ5 165 aa16.43■□□□□ 0.22
AC116366.3-201ENST00000638452 ANP32BQ92688 251 aaKnown RBP16.42■□□□□ 0.22
AC116366.3-201ENST00000638452 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
AC116366.3-201ENST00000638452 TONSLQ96HA7 1378 aa16.41■□□□□ 0.22
AC116366.3-201ENST00000638452 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
AC116366.3-201ENST00000638452 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
AC116366.3-201ENST00000638452 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.21
AC116366.3-201ENST00000638452 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
AC116366.3-201ENST00000638452 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
AC116366.3-201ENST00000638452 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
AC116366.3-201ENST00000638452 TULP1O00294 542 aaPredicted RBP16.36■□□□□ 0.21
AC116366.3-201ENST00000638452 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
AC116366.3-201ENST00000638452 TMC1Q8TDI8 760 aa16.31■□□□□ 0.2
AC116366.3-201ENST00000638452 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
AC116366.3-201ENST00000638452 PLEKHD1A6NEE1 506 aa16.28■□□□□ 0.2
AC116366.3-201ENST00000638452 MTUS2Q5JR59 1369 aa16.27■□□□□ 0.19
AC116366.3-201ENST00000638452 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms