Protein–RNA interactions for Protein: Q5GH77

XKR3, XK-related protein 3, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XKR3Q5GH77 TPM4P1-201ENST00000436100 807 ntBASIC20.01■□□□□ 0.79
XKR3Q5GH77 KRT16P4-201ENST00000453883 522 ntBASIC20.01■□□□□ 0.79
XKR3Q5GH77 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
XKR3Q5GH77 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XKR3Q5GH77 AL138831.2-201ENST00000606564 490 ntBASIC20.01■□□□□ 0.79
XKR3Q5GH77 IFNL4P1-201ENST00000607083 540 ntBASIC20.01■□□□□ 0.79
XKR3Q5GH77 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
XKR3Q5GH77 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
XKR3Q5GH77 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XKR3Q5GH77 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XKR3Q5GH77 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XKR3Q5GH77 AC125634.1-201ENST00000438758 1403 ntBASIC20.01■□□□□ 0.79
XKR3Q5GH77 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XKR3Q5GH77 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XKR3Q5GH77 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
XKR3Q5GH77 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20■□□□□ 0.79
XKR3Q5GH77 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20■□□□□ 0.79
XKR3Q5GH77 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20■□□□□ 0.79
XKR3Q5GH77 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
XKR3Q5GH77 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XKR3Q5GH77 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
XKR3Q5GH77 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
XKR3Q5GH77 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20■□□□□ 0.79
XKR3Q5GH77 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20■□□□□ 0.79
XKR3Q5GH77 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20■□□□□ 0.79
XKR3Q5GH77 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
XKR3Q5GH77 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20■□□□□ 0.79
XKR3Q5GH77 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20■□□□□ 0.79
XKR3Q5GH77 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20■□□□□ 0.79
XKR3Q5GH77 RN7SL510P-201ENST00000581311 263 ntBASIC20■□□□□ 0.79
XKR3Q5GH77 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20■□□□□ 0.79
XKR3Q5GH77 LINC01711-201ENST00000598340 967 ntBASIC20■□□□□ 0.79
XKR3Q5GH77 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20■□□□□ 0.79
XKR3Q5GH77 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20■□□□□ 0.79
XKR3Q5GH77 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XKR3Q5GH77 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XKR3Q5GH77 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
XKR3Q5GH77 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
XKR3Q5GH77 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20■□□□□ 0.79
XKR3Q5GH77 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 NUS1P2-201ENST00000417358 873 ntBASIC19.99■□□□□ 0.79
XKR3Q5GH77 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 AC009533.2-201ENST00000543664 586 ntBASIC19.99■□□□□ 0.79
XKR3Q5GH77 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 AL121894.2-201ENST00000602977 491 ntBASIC19.99■□□□□ 0.79
XKR3Q5GH77 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.99■□□□□ 0.79
XKR3Q5GH77 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 AC022898.2-201ENST00000616822 1312 ntBASIC19.99■□□□□ 0.79
XKR3Q5GH77 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XKR3Q5GH77 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.98■□□□□ 0.79
XKR3Q5GH77 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
XKR3Q5GH77 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.98■□□□□ 0.79
XKR3Q5GH77 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.98■□□□□ 0.79
XKR3Q5GH77 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.98■□□□□ 0.79
XKR3Q5GH77 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.98■□□□□ 0.79
XKR3Q5GH77 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
XKR3Q5GH77 AC114341.1-201ENST00000618070 349 ntBASIC19.98■□□□□ 0.79
XKR3Q5GH77 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
XKR3Q5GH77 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
XKR3Q5GH77 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms