Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 FOXP4-206ENST00000451305 367 ntTSL 1 (best)18.94■□□□□ 0.622e-7■■■□□ 15.4
MATR3P43243 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.717e-7■■■□□ 15.4
MATR3P43243 CDK19-204ENST00000457688 955 ntTSL 511.73□□□□□ -0.537e-7■■■□□ 15.4
MATR3P43243 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC10.01□□□□□ -0.817e-7■■■□□ 15.4
MATR3P43243 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.13□□□□□ -0.957e-7■■■□□ 15.4
MATR3P43243 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)16.26■□□□□ 0.197e-7■■■□□ 15.4
MATR3P43243 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.417e-7■■■□□ 15.4
MATR3P43243 IGF1R-204ENST00000558355 572 ntTSL 212.23□□□□□ -0.457e-7■■■□□ 15.4
MATR3P43243 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.937e-7■■■□□ 15.4
MATR3P43243 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.92■□□□□ 0.146e-11■■■□□ 15.4
MATR3P43243 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.44■■□□□ 1.51e-7■■■□□ 15.4
MATR3P43243 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.07■■□□□ 1.281e-7■■■□□ 15.4
MATR3P43243 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.131e-7■■■□□ 15.4
MATR3P43243 NFKB1-206ENST00000507079 965 ntTSL 521.39■■□□□ 1.011e-7■■■□□ 15.4
MATR3P43243 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.891e-7■■■□□ 15.4
MATR3P43243 PSMA1-206ENST00000528018 479 ntTSL 219.2■□□□□ 0.661e-7■■■□□ 15.4
MATR3P43243 NFIX-206ENST00000586797 1615 ntTSL 518.39■□□□□ 0.531e-7■■■□□ 15.4
MATR3P43243 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.38■□□□□ 0.531e-7■■■□□ 15.4
MATR3P43243 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.08■□□□□ 0.481e-7■■■□□ 15.4
MATR3P43243 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.93■□□□□ 0.461e-7■■■□□ 15.4
MATR3P43243 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.3■□□□□ 0.21e-7■■■□□ 15.4
MATR3P43243 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.131e-7■■■□□ 15.4
MATR3P43243 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.021e-7■■■□□ 15.4
MATR3P43243 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.021e-7■■■□□ 15.4
MATR3P43243 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC14.38□□□□□ -0.111e-7■■■□□ 15.4
MATR3P43243 SHANK2-212ENST00000458632 635 ntTSL 313.57□□□□□ -0.241e-7■■■□□ 15.4
MATR3P43243 NFIX-204ENST00000585382 1083 ntTSL 513.27□□□□□ -0.291e-7■■■□□ 15.4
MATR3P43243 AC007389.1-202ENST00000377977 1266 ntTSL 2 BASIC12.88□□□□□ -0.351e-7■■■□□ 15.4
MATR3P43243 SHANK2-221ENST00000618363 434 ntTSL 312.85□□□□□ -0.351e-7■■■□□ 15.4
MATR3P43243 AC007389.1-201ENST00000606978 1117 ntTSL 5 BASIC12.22□□□□□ -0.451e-7■■■□□ 15.4
MATR3P43243 NFKB1-205ENST00000505458 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.461e-7■■■□□ 15.4
MATR3P43243 NFKB1-211ENST00000513803 612 ntTSL 411.71□□□□□ -0.531e-7■■■□□ 15.4
MATR3P43243 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.617e-18■■■□□ 15.4
MATR3P43243 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.711e-7■■■□□ 15.4
MATR3P43243 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.841e-7■■■□□ 15.4
MATR3P43243 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC9.62□□□□□ -0.871e-7■■■□□ 15.4
MATR3P43243 NFKB1-209ENST00000510638 628 ntTSL 49.48□□□□□ -0.891e-7■■■□□ 15.4
MATR3P43243 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.91e-7■■■□□ 15.4
MATR3P43243 STAMBP-210ENST00000487811 695 ntTSL 38.3□□□□□ -1.081e-7■■■□□ 15.4
MATR3P43243 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.291e-7■■■□□ 15.4
MATR3P43243 BRAF-204ENST00000496384 8294 ntTSL 55.31□□□□□ -1.561e-7■■■□□ 15.4
MATR3P43243 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.8□□□□□ -1.641e-7■■■□□ 15.4
MATR3P43243 NFKB1-208ENST00000509165 557 ntTSL 53.58□□□□□ -1.841e-7■■■□□ 15.4
MATR3P43243 TMCC1-210ENST00000510323 208 ntTSL 30.32□□□□□ -2.361e-7■■■□□ 15.4
MATR3P43243 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.61■□□□□ 0.253e-6■■■□□ 15.4
MATR3P43243 C5orf66-203ENST00000513931 474 ntTSL 3 BASIC11.02□□□□□ -0.653e-6■■■□□ 15.4
MATR3P43243 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.128e-7■■■□□ 15.4
MATR3P43243 FOXP1-203ENST00000327590 5685 ntTSL 28.92□□□□□ -0.982e-6■■■□□ 15.4
MATR3P43243 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.122e-7■■■□□ 15.4
MATR3P43243 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.55■□□□□ 0.082e-7■■■□□ 15.4
MATR3P43243 STIM1-212ENST00000531332 561 ntTSL 215.43■□□□□ 0.062e-7■■■□□ 15.4
MATR3P43243 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC13.61□□□□□ -0.232e-7■■■□□ 15.4
MATR3P43243 STIM1-218ENST00000533977 2080 ntTSL 1 (best) BASIC13.28□□□□□ -0.282e-7■■■□□ 15.4
MATR3P43243 STIM1-205ENST00000526156 1024 ntTSL 212.16□□□□□ -0.462e-7■■■□□ 15.4
MATR3P43243 STIM1-206ENST00000526596 1214 ntTSL 511.59□□□□□ -0.552e-7■■■□□ 15.4
MATR3P43243 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC10.34□□□□□ -0.752e-7■■■□□ 15.4
MATR3P43243 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.852e-7■■■□□ 15.4
MATR3P43243 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC9.56□□□□□ -0.888e-6■■■□□ 15.4
MATR3P43243 LRIG2-205ENST00000492207 5076 ntTSL 57.62□□□□□ -1.192e-7■■■□□ 15.4
MATR3P43243 LRIG2-203ENST00000466161 3366 ntTSL 26.68□□□□□ -1.349e-9■■■□□ 15.4
MATR3P43243 PSMC2-205ENST00000460021 733 ntTSL 24.8□□□□□ -1.648e-6■■■□□ 15.4
MATR3P43243 LRIG2-202ENST00000466069 564 ntTSL 23.37□□□□□ -1.879e-9■■■□□ 15.4
MATR3P43243 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.44e-8■■■□□ 15.4
MATR3P43243 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.184e-8■■■□□ 15.4
MATR3P43243 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.544e-8■■■□□ 15.4
MATR3P43243 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)25.82■■□□□ 1.728e-7■■■□□ 15.4
MATR3P43243 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.99■□□□□ 0.313e-6■■■□□ 15.4
MATR3P43243 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.183e-6■■■□□ 15.4
MATR3P43243 PPIL2-204ENST00000417788 4213 ntTSL 211.15□□□□□ -0.623e-6■■■□□ 15.4
MATR3P43243 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.663e-6■■■□□ 15.4
MATR3P43243 COPB2-212ENST00000514508 635 ntTSL 413.57□□□□□ -0.242e-10■■■□□ 15.4
MATR3P43243 COPB2-211ENST00000513274 729 ntTSL 312.55□□□□□ -0.42e-10■■■□□ 15.4
MATR3P43243 COPB2-209ENST00000512242 848 ntTSL 511.99□□□□□ -0.492e-10■■■□□ 15.4
MATR3P43243 COPB2-208ENST00000512153 629 ntTSL 411.57□□□□□ -0.562e-10■■■□□ 15.4
MATR3P43243 COPB2-207ENST00000510491 669 ntTSL 510.51□□□□□ -0.732e-10■■■□□ 15.4
MATR3P43243 COPB2-206ENST00000510181 1037 ntTSL 28.45□□□□□ -1.062e-10■■■□□ 15.4
MATR3P43243 COPB2-204ENST00000504295 3524 ntTSL 26.7□□□□□ -1.342e-10■■■□□ 15.4
MATR3P43243 COPB2-213ENST00000515006 548 ntTSL 56.51□□□□□ -1.372e-10■■■□□ 15.4
MATR3P43243 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.09■□□□□ 0.331e-6■■■□□ 15.4
MATR3P43243 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.191e-6■■■□□ 15.4
MATR3P43243 PHLDB2-215ENST00000498699 3646 ntTSL 1 (best)15.6■□□□□ 0.091e-6■■■□□ 15.4
MATR3P43243 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.58□□□□□ -1.041e-6■■■□□ 15.4
MATR3P43243 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.11e-6■■■□□ 15.4
MATR3P43243 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.84□□□□□ -1.151e-6■■■□□ 15.4
MATR3P43243 PHLDB2-209ENST00000478733 2222 ntTSL 57.32□□□□□ -1.241e-6■■■□□ 15.4
MATR3P43243 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.07□□□□□ -1.441e-6■■■□□ 15.4
MATR3P43243 ASPH-223ENST00000522349 531 ntTSL 54.97□□□□□ -1.614e-6■■■□□ 15.4
MATR3P43243 ASPH-228ENST00000523927 556 ntTSL 44.17□□□□□ -1.744e-6■■■□□ 15.4
MATR3P43243 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.451e-6■■■□□ 15.3
MATR3P43243 SRPK1-201ENST00000346162 4762 ntTSL 217.58■□□□□ 0.41e-6■■■□□ 15.3
MATR3P43243 SRPK1-202ENST00000361690 4286 ntTSL 1 (best)10.99□□□□□ -0.651e-6■■■□□ 15.3
MATR3P43243 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC10.46□□□□□ -0.731e-6■■■□□ 15.3
MATR3P43243 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.8■■□□□ 1.082e-6■■■□□ 15.3
MATR3P43243 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.632e-6■■■□□ 15.3
MATR3P43243 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.46■□□□□ 0.552e-6■■■□□ 15.3
MATR3P43243 NAP1L4-210ENST00000492685 850 ntTSL 57.2□□□□□ -1.262e-6■■■□□ 15.3
MATR3P43243 NAP1L4-215ENST00000528363 685 ntTSL 26.98□□□□□ -1.292e-6■■■□□ 15.3
MATR3P43243 NAP1L4-220ENST00000532325 526 ntTSL 56.02□□□□□ -1.452e-6■■■□□ 15.3
MATR3P43243 NAP1L4-204ENST00000448187 888 ntTSL 54.27□□□□□ -1.732e-6■■■□□ 15.3
MATR3P43243 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.757e-7■■■□□ 15.3
Retrieved 100 of 16,209 protein–RNA pairs in 98.4 ms