RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 NISCHQ9Y2I1 1504 aa14.53□□□□□ -0.08
COPB2-204ENST00000504295 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
COPB2-204ENST00000504295 ZCCHC6Q5VYS8 1495 aaKnown RBP12.51□□□□□ -0.41
COPB2-204ENST00000504295 DCAF1Q9Y4B6 1507 aa12.45□□□□□ -0.42
COPB2-204ENST00000504295 MYO15BQ96JP2 1530 aa12.12□□□□□ -0.47
COPB2-204ENST00000504295 ABCC9O60706 1549 aa11.94□□□□□ -0.5
COPB2-204ENST00000504295 EIF4G1Q04637 1599 aaKnown RBP11.86□□□□□ -0.51
COPB2-204ENST00000504295 UNC13AQ9UPW8 1703 aa11.62□□□□□ -0.55
COPB2-204ENST00000504295 RB1CC1Q8TDY2 1594 aa11.49□□□□□ -0.57
COPB2-204ENST00000504295 NACADO15069 1562 aa11.48□□□□□ -0.57
COPB2-204ENST00000504295 BAZ1AQ9NRL2 1556 aaPredicted RBP11.44□□□□□ -0.58
COPB2-204ENST00000504295 PEG3Q9GZU2 1588 aa11.38□□□□□ -0.59
COPB2-204ENST00000504295 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
COPB2-204ENST00000504295 SCRIBQ14160 1630 aa11.25□□□□□ -0.61
COPB2-204ENST00000504295 WIZO95785 1651 aa11.22□□□□□ -0.61
COPB2-204ENST00000504295 CHIC1Q5VXU3 224 aa11.21□□□□□ -0.61
COPB2-204ENST00000504295 SMARCA4P51532 1647 aa11.18□□□□□ -0.62
COPB2-204ENST00000504295 MROH2BQ7Z745 1585 aa11.17□□□□□ -0.62
COPB2-204ENST00000504295 TOP2AP11388 1531 aaKnown RBP11.16□□□□□ -0.62
COPB2-204ENST00000504295 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
COPB2-204ENST00000504295 PRDM2Q13029 1718 aa11.14□□□□□ -0.63
COPB2-204ENST00000504295 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
COPB2-204ENST00000504295 SHROOM4Q9ULL8 1493 aa11.11□□□□□ -0.63
COPB2-204ENST00000504295 CECR2Q9BXF3 1484 aa11.02□□□□□ -0.65
COPB2-204ENST00000504295 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
COPB2-204ENST00000504295 HRCP23327 699 aa11□□□□□ -0.65
COPB2-204ENST00000504295 BIVM-ERCC5R4GMW8 1640 aa11□□□□□ -0.65
COPB2-204ENST00000504295 WRNQ14191 1432 aaPredicted RBP eCLIP10.97□□□□□ -0.65
COPB2-204ENST00000504295 KIF21BO75037 1637 aa10.95□□□□□ -0.66
COPB2-204ENST00000504295 SYNJ1O43426 1573 aa10.8□□□□□ -0.68
COPB2-204ENST00000504295 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
COPB2-204ENST00000504295 TOP2BQ02880 1626 aa10.79□□□□□ -0.68
COPB2-204ENST00000504295 HMGXB3Q12766 1538 aa10.76□□□□□ -0.69
COPB2-204ENST00000504295 ABCC8Q09428 1581 aa10.71□□□□□ -0.69
COPB2-204ENST00000504295 SUPT5HO00267 1087 aaKnown RBP10.71□□□□□ -0.69
COPB2-204ENST00000504295 WDR97A6NE52 1622 aa10.7□□□□□ -0.7
COPB2-204ENST00000504295 ERICH3Q5RHP9 1530 aa10.69□□□□□ -0.7
COPB2-204ENST00000504295 EEA1Q15075 1411 aa10.69□□□□□ -0.7
COPB2-204ENST00000504295 BAZ1BQ9UIG0 1483 aaKnown RBP10.68□□□□□ -0.7
COPB2-204ENST00000504295 CUX2O14529 1486 aa10.64□□□□□ -0.71
COPB2-204ENST00000504295 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
COPB2-204ENST00000504295 CFAP43Q8NDM7 1665 aa10.61□□□□□ -0.71
COPB2-204ENST00000504295 ATAD2BQ9ULI0 1458 aa10.57□□□□□ -0.72
COPB2-204ENST00000504295 TNIKQ9UKE5 1360 aa10.56□□□□□ -0.72
COPB2-204ENST00000504295 LRRIQ1Q96JM4 1722 aa10.56□□□□□ -0.72
COPB2-204ENST00000504295 TRIM26Q12899 539 aaPredicted RBP10.55□□□□□ -0.72
COPB2-204ENST00000504295 MAP3K1Q13233 1512 aa10.52□□□□□ -0.72
COPB2-204ENST00000504295 PRXQ9BXM0 1461 aa10.51□□□□□ -0.73
COPB2-204ENST00000504295 RUSC2Q8N2Y8 1516 aa10.51□□□□□ -0.73
COPB2-204ENST00000504295 KIF21AQ7Z4S6 1674 aa10.49□□□□□ -0.73
COPB2-204ENST00000504295 NCAPD3P42695 1498 aa10.46□□□□□ -0.73
COPB2-204ENST00000504295 GOLGA3Q08378 1498 aa10.46□□□□□ -0.73
COPB2-204ENST00000504295 LOC105371045A0A1W2PR82 267 aa10.46□□□□□ -0.73
COPB2-204ENST00000504295 CUX1P39880 1505 aa10.46□□□□□ -0.73
COPB2-204ENST00000504295 CEP162Q5TB80 1403 aa10.46□□□□□ -0.73
COPB2-204ENST00000504295 SOGA1O94964 1423 aa10.46□□□□□ -0.74
COPB2-204ENST00000504295 CTTNBP2Q8WZ74 1663 aa10.45□□□□□ -0.74
COPB2-204ENST00000504295 ARAP1Q96P48 1450 aa10.44□□□□□ -0.74
COPB2-204ENST00000504295 CEP164Q9UPV0 1460 aa10.43□□□□□ -0.74
COPB2-204ENST00000504295 CFTRP13569 1480 aa10.4□□□□□ -0.75
COPB2-204ENST00000504295 POLR1AO95602 1720 aaPredicted RBP10.38□□□□□ -0.75
COPB2-204ENST00000504295 PPARGC1BQ86YN6 1023 aaKnown RBP10.38□□□□□ -0.75
COPB2-204ENST00000504295 CC2D2AQ9P2K1 1620 aa10.37□□□□□ -0.75
COPB2-204ENST00000504295 SAMD9Q5K651 1589 aa10.37□□□□□ -0.75
COPB2-204ENST00000504295 PCGF6Q9BYE7 350 aa10.36□□□□□ -0.75
COPB2-204ENST00000504295 ABCA5Q8WWZ7 1642 aa10.35□□□□□ -0.75
COPB2-204ENST00000504295 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
COPB2-204ENST00000504295 VPS8Q8N3P4 1428 aa10.34□□□□□ -0.75
COPB2-204ENST00000504295 CUL7Q14999 1698 aa10.32□□□□□ -0.76
COPB2-204ENST00000504295 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
COPB2-204ENST00000504295 RAPGEF2Q9Y4G8 1499 aa10.31□□□□□ -0.76
COPB2-204ENST00000504295 ARHGEF11O15085 1522 aa10.3□□□□□ -0.76
COPB2-204ENST00000504295 CLIP1P30622 1438 aa10.3□□□□□ -0.76
COPB2-204ENST00000504295 DNAJC5BQ9UF47 199 aa10.29□□□□□ -0.76
COPB2-204ENST00000504295 KDM5BQ9UGL1 1544 aa10.29□□□□□ -0.76
COPB2-204ENST00000504295 TIAM1Q13009 1591 aa10.29□□□□□ -0.76
COPB2-204ENST00000504295 MAPKBP1O60336 1514 aa10.28□□□□□ -0.76
COPB2-204ENST00000504295 THOC2Q8NI27 1593 aaKnown RBP10.27□□□□□ -0.76
COPB2-204ENST00000504295 GCC2Q8IWJ2 1684 aa10.27□□□□□ -0.77
COPB2-204ENST00000504295 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.77
COPB2-204ENST00000504295 ARHGAP35Q9NRY4 1499 aa10.22□□□□□ -0.77
COPB2-204ENST00000504295 TRIM41Q8WV44 630 aa10.22□□□□□ -0.77
COPB2-204ENST00000504295 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.77
COPB2-204ENST00000504295 TARBP1Q13395 1621 aaKnown RBP10.21□□□□□ -0.78
COPB2-204ENST00000504295 EFCAB5A4FU69 1503 aa10.2□□□□□ -0.78
COPB2-204ENST00000504295 PBRM1Q86U86 1689 aa10.19□□□□□ -0.78
COPB2-204ENST00000504295 PCF11O94913 1555 aaKnown RBP10.19□□□□□ -0.78
COPB2-204ENST00000504295 SNAPC4Q5SXM2 1469 aa10.17□□□□□ -0.78
COPB2-204ENST00000504295 ABCA10Q8WWZ4 1543 aa10.16□□□□□ -0.78
COPB2-204ENST00000504295 HECW1Q76N89 1606 aa10.15□□□□□ -0.78
COPB2-204ENST00000504295 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
COPB2-204ENST00000504295 CROCC2H7BZ55 1655 aa10.14□□□□□ -0.79
COPB2-204ENST00000504295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.14□□□□□ -0.79
COPB2-204ENST00000504295 ADCY10Q96PN6 1610 aa10.12□□□□□ -0.79
COPB2-204ENST00000504295 LAMC3Q9Y6N6 1575 aa10.11□□□□□ -0.79
COPB2-204ENST00000504295 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
COPB2-204ENST00000504295 FYCO1Q9BQS8 1478 aa10.07□□□□□ -0.8
COPB2-204ENST00000504295 DENND4BO75064 1496 aaPredicted RBP10.07□□□□□ -0.8
COPB2-204ENST00000504295 DHX57Q6P158 1386 aaKnown RBP10.07□□□□□ -0.8
COPB2-204ENST00000504295 FGD5Q6ZNL6 1462 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms