RNA–Protein interactions for RNA: ENST00000528018.1

PSMA1-206, Transcript of proteasome subunit alpha 1, humanhuman

TSL 2

Gene PSMA1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-206ENST00000528018 NISCHQ9Y2I1 1504 aa41.8■■■■■ 4.28
PSMA1-206ENST00000528018 CCDC180Q9P1Z9 1646 aa37.01■■■■□ 3.52
PSMA1-206ENST00000528018 ABCC9O60706 1549 aa35.78■■■■□ 3.32
PSMA1-206ENST00000528018 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
PSMA1-206ENST00000528018 DCAF8L2P0C7V8 631 aa34.73■■■■□ 3.15
PSMA1-206ENST00000528018 NACADO15069 1562 aa34.68■■■■□ 3.14
PSMA1-206ENST00000528018 RB1CC1Q8TDY2 1594 aa34.63■■■■□ 3.13
PSMA1-206ENST00000528018 DCAF1Q9Y4B6 1507 aa34.62■■■■□ 3.13
PSMA1-206ENST00000528018 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
PSMA1-206ENST00000528018 SCRIBQ14160 1630 aa33.8■■■■□ 3
PSMA1-206ENST00000528018 UNC13AQ9UPW8 1703 aa33.8■■■■□ 3
PSMA1-206ENST00000528018 BICRAQ9NZM4 1560 aa33.52■■■□□ 2.96
PSMA1-206ENST00000528018 PABPN1Q86U42 306 aaKnown RBP eCLIP33.47■■■□□ 2.95
PSMA1-206ENST00000528018 SHROOM4Q9ULL8 1493 aa33.27■■■□□ 2.92
PSMA1-206ENST00000528018 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
PSMA1-206ENST00000528018 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
PSMA1-206ENST00000528018 CECR2Q9BXF3 1484 aa32.5■■■□□ 2.79
PSMA1-206ENST00000528018 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
PSMA1-206ENST00000528018 CC2D2AQ9P2K1 1620 aa32.38■■■□□ 2.77
PSMA1-206ENST00000528018 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
PSMA1-206ENST00000528018 MROH2BQ7Z745 1585 aa32.22■■■□□ 2.75
PSMA1-206ENST00000528018 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
PSMA1-206ENST00000528018 ATAD2BQ9ULI0 1458 aa32.06■■■□□ 2.72
PSMA1-206ENST00000528018 PEG3Q9GZU2 1588 aa32.03■■■□□ 2.72
PSMA1-206ENST00000528018 RSF1Q96T23 1441 aaPredicted RBP32■■■□□ 2.71
PSMA1-206ENST00000528018 NCAPD3P42695 1498 aa31.97■■■□□ 2.71
PSMA1-206ENST00000528018 WIZO95785 1651 aa31.89■■■□□ 2.7
PSMA1-206ENST00000528018 HMGXB3Q12766 1538 aa31.89■■■□□ 2.7
PSMA1-206ENST00000528018 BAZ1BQ9UIG0 1483 aaKnown RBP31.85■■■□□ 2.69
PSMA1-206ENST00000528018 TOP2AP11388 1531 aaKnown RBP31.62■■■□□ 2.65
PSMA1-206ENST00000528018 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.63
PSMA1-206ENST00000528018 CCDC88BA6NC98 1476 aa31.2■■■□□ 2.58
PSMA1-206ENST00000528018 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
PSMA1-206ENST00000528018 NESP48681 1621 aa31.07■■■□□ 2.56
PSMA1-206ENST00000528018 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
PSMA1-206ENST00000528018 CFTRP13569 1480 aa30.98■■■□□ 2.55
PSMA1-206ENST00000528018 PDS5BQ9NTI5 1447 aa30.86■■■□□ 2.53
PSMA1-206ENST00000528018 ERCC6Q03468 1493 aa30.84■■■□□ 2.53
PSMA1-206ENST00000528018 PRDM2Q13029 1718 aa30.8■■■□□ 2.52
PSMA1-206ENST00000528018 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
PSMA1-206ENST00000528018 FANCD2Q9BXW9 1451 aa30.73■■■□□ 2.51
PSMA1-206ENST00000528018 CEP164Q9UPV0 1460 aa30.67■■■□□ 2.5
PSMA1-206ENST00000528018 THOC2Q8NI27 1593 aaKnown RBP30.54■■■□□ 2.48
PSMA1-206ENST00000528018 MRC2Q9UBG0 1479 aa30.53■■■□□ 2.48
PSMA1-206ENST00000528018 WDR62O43379 1518 aa30.41■■■□□ 2.46
PSMA1-206ENST00000528018 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.46
PSMA1-206ENST00000528018 CUX2O14529 1486 aa30.35■■■□□ 2.45
PSMA1-206ENST00000528018 ABCC8Q09428 1581 aa30.32■■■□□ 2.44
PSMA1-206ENST00000528018 DNMBPQ6XZF7 1577 aa30.3■■■□□ 2.44
PSMA1-206ENST00000528018 TOPBP1Q92547 1522 aa30.28■■■□□ 2.44
PSMA1-206ENST00000528018 CUX1P39880 1505 aa30.21■■■□□ 2.43
PSMA1-206ENST00000528018 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.42
PSMA1-206ENST00000528018 SYNJ1O43426 1573 aa30.08■■■□□ 2.41
PSMA1-206ENST00000528018 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
PSMA1-206ENST00000528018 BIVM-ERCC5R4GMW8 1640 aa30.07■■■□□ 2.4
PSMA1-206ENST00000528018 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
PSMA1-206ENST00000528018 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
PSMA1-206ENST00000528018 IFT140Q96RY7 1462 aa30■■■□□ 2.39
PSMA1-206ENST00000528018 DNAJC5Q9H3Z4 198 aa29.96■■■□□ 2.39
PSMA1-206ENST00000528018 SOGA1O94964 1423 aa29.93■■■□□ 2.38
PSMA1-206ENST00000528018 TARBP1Q13395 1621 aaKnown RBP29.91■■■□□ 2.38
PSMA1-206ENST00000528018 RAD54L2Q9Y4B4 1467 aa29.9■■■□□ 2.38
PSMA1-206ENST00000528018 ZNF608Q9ULD9 1512 aaPredicted RBP29.8■■■□□ 2.36
PSMA1-206ENST00000528018 WDR97A6NE52 1622 aa29.78■■■□□ 2.36
PSMA1-206ENST00000528018 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
PSMA1-206ENST00000528018 EIF4G3O43432 1585 aaKnown RBP29.74■■■□□ 2.35
PSMA1-206ENST00000528018 TRIM41Q8WV44 630 aa29.74■■■□□ 2.35
PSMA1-206ENST00000528018 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
PSMA1-206ENST00000528018 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.34
PSMA1-206ENST00000528018 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
PSMA1-206ENST00000528018 ABCA5Q8WWZ7 1642 aa29.63■■■□□ 2.33
PSMA1-206ENST00000528018 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
PSMA1-206ENST00000528018 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
PSMA1-206ENST00000528018 PBRM1Q86U86 1689 aa29.53■■■□□ 2.32
PSMA1-206ENST00000528018 KIF27Q86VH2 1401 aa29.53■■■□□ 2.32
PSMA1-206ENST00000528018 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.31
PSMA1-206ENST00000528018 ERICH3Q5RHP9 1530 aa29.44■■■□□ 2.3
PSMA1-206ENST00000528018 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
PSMA1-206ENST00000528018 RUSC2Q8N2Y8 1516 aa29.34■■■□□ 2.29
PSMA1-206ENST00000528018 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
PSMA1-206ENST00000528018 SYNJ2O15056 1496 aa29.31■■■□□ 2.28
PSMA1-206ENST00000528018 IGF1RP08069 1367 aa29.3■■■□□ 2.28
PSMA1-206ENST00000528018 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
PSMA1-206ENST00000528018 CUL7Q14999 1698 aa29.28■■■□□ 2.28
PSMA1-206ENST00000528018 CHD1O14646 1710 aa29.27■■■□□ 2.28
PSMA1-206ENST00000528018 EEA1Q15075 1411 aa29.27■■■□□ 2.28
PSMA1-206ENST00000528018 FBLN2P98095 1184 aa29.26■■■□□ 2.27
PSMA1-206ENST00000528018 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
PSMA1-206ENST00000528018 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
PSMA1-206ENST00000528018 CARMIL1Q5VZK9 1371 aa29.16■■■□□ 2.26
PSMA1-206ENST00000528018 OSCARQ8IYS5 282 aa29.12■■■□□ 2.25
PSMA1-206ENST00000528018 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
PSMA1-206ENST00000528018 CSRNP3Q8WYN3 585 aa29.11■■■□□ 2.25
PSMA1-206ENST00000528018 RAPGEF2Q9Y4G8 1499 aa29.06■■■□□ 2.24
PSMA1-206ENST00000528018 PRXQ9BXM0 1461 aa29.04■■■□□ 2.24
PSMA1-206ENST00000528018 NUP160Q12769 1436 aa29.01■■■□□ 2.23
PSMA1-206ENST00000528018 CEP170Q5SW79 1584 aa29■■■□□ 2.23
PSMA1-206ENST00000528018 CLASP1Q7Z460 1538 aa28.96■■■□□ 2.23
PSMA1-206ENST00000528018 KIF21BO75037 1637 aa28.92■■■□□ 2.22
PSMA1-206ENST00000528018 KIAA0586Q9BVV6 1533 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms