RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 NISCHQ9Y2I1 1504 aa20.14■□□□□ 0.81
NFKB1-209ENST00000510638 ABCC9O60706 1549 aa18.2■□□□□ 0.5
NFKB1-209ENST00000510638 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
NFKB1-209ENST00000510638 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
NFKB1-209ENST00000510638 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
NFKB1-209ENST00000510638 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
NFKB1-209ENST00000510638 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
NFKB1-209ENST00000510638 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
NFKB1-209ENST00000510638 NACADO15069 1562 aa16.85■□□□□ 0.29
NFKB1-209ENST00000510638 ZCCHC6Q5VYS8 1495 aaKnown RBP16.85■□□□□ 0.29
NFKB1-209ENST00000510638 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
NFKB1-209ENST00000510638 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
NFKB1-209ENST00000510638 PABPN1Q86U42 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
NFKB1-209ENST00000510638 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
NFKB1-209ENST00000510638 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
NFKB1-209ENST00000510638 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
NFKB1-209ENST00000510638 CECR2Q9BXF3 1484 aa16.53■□□□□ 0.24
NFKB1-209ENST00000510638 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
NFKB1-209ENST00000510638 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
NFKB1-209ENST00000510638 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
NFKB1-209ENST00000510638 CUX2O14529 1486 aa16.17■□□□□ 0.18
NFKB1-209ENST00000510638 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
NFKB1-209ENST00000510638 ERCC6Q03468 1493 aa15.83■□□□□ 0.12
NFKB1-209ENST00000510638 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
NFKB1-209ENST00000510638 BAZ1AQ9NRL2 1556 aaPredicted RBP15.6■□□□□ 0.09
NFKB1-209ENST00000510638 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.09
NFKB1-209ENST00000510638 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
NFKB1-209ENST00000510638 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
NFKB1-209ENST00000510638 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
NFKB1-209ENST00000510638 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
NFKB1-209ENST00000510638 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
NFKB1-209ENST00000510638 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
NFKB1-209ENST00000510638 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
NFKB1-209ENST00000510638 NESP48681 1621 aa15.39■□□□□ 0.05
NFKB1-209ENST00000510638 KIF21AQ7Z4S6 1674 aa15.38■□□□□ 0.05
NFKB1-209ENST00000510638 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
NFKB1-209ENST00000510638 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
NFKB1-209ENST00000510638 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
NFKB1-209ENST00000510638 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
NFKB1-209ENST00000510638 WIZO95785 1651 aa15.31■□□□□ 0.04
NFKB1-209ENST00000510638 TOP2AP11388 1531 aaKnown RBP15.24■□□□□ 0.03
NFKB1-209ENST00000510638 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
NFKB1-209ENST00000510638 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
NFKB1-209ENST00000510638 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
NFKB1-209ENST00000510638 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
NFKB1-209ENST00000510638 WDR62O43379 1518 aa15.16■□□□□ 0.02
NFKB1-209ENST00000510638 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
NFKB1-209ENST00000510638 MRC2Q9UBG0 1479 aa15.13■□□□□ 0.01
NFKB1-209ENST00000510638 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
NFKB1-209ENST00000510638 ARHGEF11O15085 1522 aa15□□□□□ -0.01
NFKB1-209ENST00000510638 CADPSQ9ULU8 1353 aa14.95□□□□□ -0.02
NFKB1-209ENST00000510638 CFTRP13569 1480 aa14.9□□□□□ -0.02
NFKB1-209ENST00000510638 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
NFKB1-209ENST00000510638 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
NFKB1-209ENST00000510638 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
NFKB1-209ENST00000510638 FANCD2Q9BXW9 1451 aa14.77□□□□□ -0.04
NFKB1-209ENST00000510638 CYB5RLQ6IPT4 315 aa14.77□□□□□ -0.05
NFKB1-209ENST00000510638 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
NFKB1-209ENST00000510638 CHD1O14646 1710 aa14.74□□□□□ -0.05
NFKB1-209ENST00000510638 PRDM2Q13029 1718 aa14.73□□□□□ -0.05
NFKB1-209ENST00000510638 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
NFKB1-209ENST00000510638 WRNQ14191 1432 aaPredicted RBP eCLIP14.64□□□□□ -0.07
NFKB1-209ENST00000510638 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
NFKB1-209ENST00000510638 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
NFKB1-209ENST00000510638 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
NFKB1-209ENST00000510638 ZNF608Q9ULD9 1512 aaPredicted RBP14.59□□□□□ -0.07
NFKB1-209ENST00000510638 ILDR1Q86SU0 546 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-209ENST00000510638 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
NFKB1-209ENST00000510638 DNMBPQ6XZF7 1577 aa14.54□□□□□ -0.08
NFKB1-209ENST00000510638 CUX1P39880 1505 aa14.53□□□□□ -0.08
NFKB1-209ENST00000510638 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
NFKB1-209ENST00000510638 TOP2BQ02880 1626 aa14.49□□□□□ -0.09
NFKB1-209ENST00000510638 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
NFKB1-209ENST00000510638 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
NFKB1-209ENST00000510638 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
NFKB1-209ENST00000510638 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
NFKB1-209ENST00000510638 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
NFKB1-209ENST00000510638 SOGA1O94964 1423 aa14.43□□□□□ -0.1
NFKB1-209ENST00000510638 TARBP1Q13395 1621 aaKnown RBP14.42□□□□□ -0.1
NFKB1-209ENST00000510638 KIF13AQ9H1H9 1805 aa14.4□□□□□ -0.1
NFKB1-209ENST00000510638 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
NFKB1-209ENST00000510638 WDR97A6NE52 1622 aa14.36□□□□□ -0.11
NFKB1-209ENST00000510638 ABCA10Q8WWZ4 1543 aa14.34□□□□□ -0.11
NFKB1-209ENST00000510638 KIF27Q86VH2 1401 aa14.33□□□□□ -0.11
NFKB1-209ENST00000510638 AQRO60306 1485 aaKnown RBP eCLIP14.33□□□□□ -0.12
NFKB1-209ENST00000510638 FBLN2P98095 1184 aa14.33□□□□□ -0.12
NFKB1-209ENST00000510638 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
NFKB1-209ENST00000510638 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
NFKB1-209ENST00000510638 EEA1Q15075 1411 aa14.3□□□□□ -0.12
NFKB1-209ENST00000510638 MAGI1Q96QZ7 1491 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-209ENST00000510638 FAM9AQ8IZU1 332 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-209ENST00000510638 SNAPC4Q5SXM2 1469 aa14.23□□□□□ -0.13
NFKB1-209ENST00000510638 ERCC6L2Q5T890 1561 aa14.22□□□□□ -0.13
NFKB1-209ENST00000510638 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
NFKB1-209ENST00000510638 GRIN2BQ13224 1484 aa14.21□□□□□ -0.13
NFKB1-209ENST00000510638 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
NFKB1-209ENST00000510638 IGF1RP08069 1367 aa14.19□□□□□ -0.14
NFKB1-209ENST00000510638 ABCA5Q8WWZ7 1642 aa14.19□□□□□ -0.14
NFKB1-209ENST00000510638 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
NFKB1-209ENST00000510638 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms