RNA–Protein interactions for RNA: ENST00000487811.1

STAMBP-210, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-210ENST00000487811 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
STAMBP-210ENST00000487811 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
STAMBP-210ENST00000487811 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
STAMBP-210ENST00000487811 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
STAMBP-210ENST00000487811 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
STAMBP-210ENST00000487811 PHF23Q9BUL5 403 aaPredicted RBP15.73■□□□□ 0.11
STAMBP-210ENST00000487811 FOXD1Q16676 465 aa15.21■□□□□ 0.03
STAMBP-210ENST00000487811 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
STAMBP-210ENST00000487811 MSH5O43196 834 aa14.73□□□□□ -0.05
STAMBP-210ENST00000487811 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
STAMBP-210ENST00000487811 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
STAMBP-210ENST00000487811 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
STAMBP-210ENST00000487811 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
STAMBP-210ENST00000487811 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
STAMBP-210ENST00000487811 NACADO15069 1562 aa13.83□□□□□ -0.19
STAMBP-210ENST00000487811 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
STAMBP-210ENST00000487811 ABCC9O60706 1549 aa13.79□□□□□ -0.2
STAMBP-210ENST00000487811 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.22
STAMBP-210ENST00000487811 SCRIBQ14160 1630 aa13.52□□□□□ -0.25
STAMBP-210ENST00000487811 SUPT5HO00267 1087 aaKnown RBP13.41□□□□□ -0.26
STAMBP-210ENST00000487811 CACNB1Q02641 598 aaPredicted RBP13.4□□□□□ -0.26
STAMBP-210ENST00000487811 RSF1Q96T23 1441 aaPredicted RBP13.25□□□□□ -0.29
STAMBP-210ENST00000487811 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
STAMBP-210ENST00000487811 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
STAMBP-210ENST00000487811 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
STAMBP-210ENST00000487811 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
STAMBP-210ENST00000487811 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
STAMBP-210ENST00000487811 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
STAMBP-210ENST00000487811 ADRA2BP18089 450 aa13.06□□□□□ -0.32
STAMBP-210ENST00000487811 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
STAMBP-210ENST00000487811 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
STAMBP-210ENST00000487811 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
STAMBP-210ENST00000487811 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
STAMBP-210ENST00000487811 WIZO95785 1651 aa12.93□□□□□ -0.34
STAMBP-210ENST00000487811 SMARCA2P51531 1590 aa12.9□□□□□ -0.35
STAMBP-210ENST00000487811 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
STAMBP-210ENST00000487811 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
STAMBP-210ENST00000487811 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
STAMBP-210ENST00000487811 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
STAMBP-210ENST00000487811 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
STAMBP-210ENST00000487811 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
STAMBP-210ENST00000487811 EIF4G1Q04637 1599 aaKnown RBP12.76□□□□□ -0.37
STAMBP-210ENST00000487811 POTEHQ6S545 545 aa12.74□□□□□ -0.37
STAMBP-210ENST00000487811 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
STAMBP-210ENST00000487811 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
STAMBP-210ENST00000487811 EEA1Q15075 1411 aa12.53□□□□□ -0.4
STAMBP-210ENST00000487811 WRNQ14191 1432 aaPredicted RBP eCLIP12.51□□□□□ -0.412e-6■■■■□ 22.3
STAMBP-210ENST00000487811 CC2D2AQ9P2K1 1620 aa12.5□□□□□ -0.41
STAMBP-210ENST00000487811 CFTRP13569 1480 aa12.49□□□□□ -0.41
STAMBP-210ENST00000487811 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
STAMBP-210ENST00000487811 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
STAMBP-210ENST00000487811 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
STAMBP-210ENST00000487811 MAPK8IP2Q13387 824 aaPredicted RBP12.39□□□□□ -0.43
STAMBP-210ENST00000487811 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
STAMBP-210ENST00000487811 LOC105371045A0A1W2PR82 267 aa12.36□□□□□ -0.43
STAMBP-210ENST00000487811 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
STAMBP-210ENST00000487811 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.43
STAMBP-210ENST00000487811 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
STAMBP-210ENST00000487811 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
STAMBP-210ENST00000487811 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
STAMBP-210ENST00000487811 SOGA1O94964 1423 aa12.29□□□□□ -0.44
STAMBP-210ENST00000487811 LAMC3Q9Y6N6 1575 aa12.29□□□□□ -0.44
STAMBP-210ENST00000487811 GOLGA3Q08378 1498 aa12.27□□□□□ -0.45
STAMBP-210ENST00000487811 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
STAMBP-210ENST00000487811 TNIKQ9UKE5 1360 aa12.26□□□□□ -0.45
STAMBP-210ENST00000487811 CUX1P39880 1505 aa12.26□□□□□ -0.45
STAMBP-210ENST00000487811 FANCD2Q9BXW9 1451 aa12.25□□□□□ -0.45
STAMBP-210ENST00000487811 KIF21BO75037 1637 aa12.23□□□□□ -0.45
STAMBP-210ENST00000487811 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
STAMBP-210ENST00000487811 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
STAMBP-210ENST00000487811 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
STAMBP-210ENST00000487811 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
STAMBP-210ENST00000487811 ERICH3Q5RHP9 1530 aa12.17□□□□□ -0.46
STAMBP-210ENST00000487811 RUSC2Q8N2Y8 1516 aa12.17□□□□□ -0.46
STAMBP-210ENST00000487811 PRXQ9BXM0 1461 aa12.14□□□□□ -0.47
STAMBP-210ENST00000487811 CEP162Q5TB80 1403 aa12.13□□□□□ -0.47
STAMBP-210ENST00000487811 UBTFP17480 764 aaKnown RBP12.13□□□□□ -0.47
STAMBP-210ENST00000487811 FGD5Q6ZNL6 1462 aa12.13□□□□□ -0.47
STAMBP-210ENST00000487811 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
STAMBP-210ENST00000487811 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
STAMBP-210ENST00000487811 NESP48681 1621 aa12.1□□□□□ -0.47
STAMBP-210ENST00000487811 CUX2O14529 1486 aa12.09□□□□□ -0.47
STAMBP-210ENST00000487811 ABCA10Q8WWZ4 1543 aa12.09□□□□□ -0.47
STAMBP-210ENST00000487811 POLA1P09884 1462 aaPredicted RBP12.07□□□□□ -0.48
STAMBP-210ENST00000487811 RAPGEF2Q9Y4G8 1499 aa12.06□□□□□ -0.48
STAMBP-210ENST00000487811 DCAF8L1A6NGE4 600 aa12.04□□□□□ -0.48
STAMBP-210ENST00000487811 IGF1RP08069 1367 aa12.04□□□□□ -0.48
STAMBP-210ENST00000487811 CLIP1P30622 1438 aa12.03□□□□□ -0.48
STAMBP-210ENST00000487811 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
STAMBP-210ENST00000487811 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
STAMBP-210ENST00000487811 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
STAMBP-210ENST00000487811 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
STAMBP-210ENST00000487811 PCGF6Q9BYE7 350 aa11.99□□□□□ -0.49
STAMBP-210ENST00000487811 VPS8Q8N3P4 1428 aa11.97□□□□□ -0.49
STAMBP-210ENST00000487811 CUL7Q14999 1698 aa11.97□□□□□ -0.49
STAMBP-210ENST00000487811 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
STAMBP-210ENST00000487811 DNAJC5BQ9UF47 199 aa11.96□□□□□ -0.49
STAMBP-210ENST00000487811 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
STAMBP-210ENST00000487811 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
STAMBP-210ENST00000487811 WDR62O43379 1518 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms