RNA–Protein interactions for RNA: ENST00000339566.7

STAMBP-201, Transcript of STAM binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene STAMBP, Length 6,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-201ENST00000339566 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
STAMBP-201ENST00000339566 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
STAMBP-201ENST00000339566 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
STAMBP-201ENST00000339566 NISCHQ9Y2I1 1504 aa13.2□□□□□ -0.3
STAMBP-201ENST00000339566 PCGF6Q9BYE7 350 aa13.19□□□□□ -0.3
STAMBP-201ENST00000339566 SHROOM4Q9ULL8 1493 aa13.09□□□□□ -0.31
STAMBP-201ENST00000339566 MYT1Q01538 1121 aa12.94□□□□□ -0.34
STAMBP-201ENST00000339566 HRCP23327 699 aa12.9□□□□□ -0.34
STAMBP-201ENST00000339566 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
STAMBP-201ENST00000339566 CENPBP07199 599 aaPredicted RBP12.82□□□□□ -0.36
STAMBP-201ENST00000339566 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
STAMBP-201ENST00000339566 PPARGC1BQ86YN6 1023 aaKnown RBP12.71□□□□□ -0.37
STAMBP-201ENST00000339566 FAM9AQ8IZU1 332 aaPredicted RBP12.63□□□□□ -0.39
STAMBP-201ENST00000339566 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
STAMBP-201ENST00000339566 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
STAMBP-201ENST00000339566 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
STAMBP-201ENST00000339566 TRIM26Q12899 539 aaPredicted RBP12.5□□□□□ -0.41
STAMBP-201ENST00000339566 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
STAMBP-201ENST00000339566 LOC105371045A0A1W2PR82 267 aa12.34□□□□□ -0.43
STAMBP-201ENST00000339566 APLP2Q06481 763 aa12.34□□□□□ -0.43
STAMBP-201ENST00000339566 CHIC1Q5VXU3 224 aa12.34□□□□□ -0.43
STAMBP-201ENST00000339566 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
STAMBP-201ENST00000339566 GTF3C3Q9Y5Q9 886 aa12.27□□□□□ -0.44
STAMBP-201ENST00000339566 NEFLP07196 543 aa12.23□□□□□ -0.45
STAMBP-201ENST00000339566 DIEXFQ68CQ4 756 aaKnown RBP12.2□□□□□ -0.46
STAMBP-201ENST00000339566 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
STAMBP-201ENST00000339566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
STAMBP-201ENST00000339566 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
STAMBP-201ENST00000339566 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
STAMBP-201ENST00000339566 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
STAMBP-201ENST00000339566 NEUROD1Q13562 356 aa11.96□□□□□ -0.5
STAMBP-201ENST00000339566 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
STAMBP-201ENST00000339566 BCANQ96GW7 911 aa11.91□□□□□ -0.5
STAMBP-201ENST00000339566 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
STAMBP-201ENST00000339566 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
STAMBP-201ENST00000339566 ITGAEP38570 1179 aa11.76□□□□□ -0.53
STAMBP-201ENST00000339566 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
STAMBP-201ENST00000339566 DCAF1Q9Y4B6 1507 aa11.71□□□□□ -0.53
STAMBP-201ENST00000339566 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
STAMBP-201ENST00000339566 CDK11AQ9UQ88 783 aaPredicted RBP11.65□□□□□ -0.54
STAMBP-201ENST00000339566 CNGB1Q14028 1251 aaPredicted RBP11.62□□□□□ -0.55
STAMBP-201ENST00000339566 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
STAMBP-201ENST00000339566 FKBP8Q14318 412 aa11.59□□□□□ -0.55
STAMBP-201ENST00000339566 MYO15BQ96JP2 1530 aa11.59□□□□□ -0.55
STAMBP-201ENST00000339566 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
STAMBP-201ENST00000339566 MIER1Q8N108 512 aa11.57□□□□□ -0.56
STAMBP-201ENST00000339566 POLR3GLQ9BT43 218 aa11.57□□□□□ -0.56
STAMBP-201ENST00000339566 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
STAMBP-201ENST00000339566 EIF5BO60841 1220 aaKnown RBP11.52□□□□□ -0.56
STAMBP-201ENST00000339566 ANP32CO43423 234 aa11.51□□□□□ -0.57
STAMBP-201ENST00000339566 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
STAMBP-201ENST00000339566 ANP32AP39687 249 aaKnown RBP11.43□□□□□ -0.58
STAMBP-201ENST00000339566 NBR1Q14596 966 aa11.43□□□□□ -0.58
STAMBP-201ENST00000339566 TRIM52Q96A61 297 aa11.38□□□□□ -0.59
STAMBP-201ENST00000339566 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
STAMBP-201ENST00000339566 FAM50AQ14320 339 aaKnown RBP11.36□□□□□ -0.59
STAMBP-201ENST00000339566 DDX10Q13206 875 aaKnown RBP11.36□□□□□ -0.59
STAMBP-201ENST00000339566 CCDC180Q9P1Z9 1646 aa11.35□□□□□ -0.59
STAMBP-201ENST00000339566 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
STAMBP-201ENST00000339566 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
STAMBP-201ENST00000339566 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
STAMBP-201ENST00000339566 CSRNP3Q8WYN3 585 aa11.31□□□□□ -0.6
STAMBP-201ENST00000339566 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
STAMBP-201ENST00000339566 GLIPR1L2Q4G1C9 344 aa11.23□□□□□ -0.61
STAMBP-201ENST00000339566 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
STAMBP-201ENST00000339566 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
STAMBP-201ENST00000339566 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
STAMBP-201ENST00000339566 FAM9BQ8IZU0 186 aa11.2□□□□□ -0.62
STAMBP-201ENST00000339566 RBM19Q9Y4C8 960 aaKnown RBP11.2□□□□□ -0.62
STAMBP-201ENST00000339566 HIRIP3Q9BW71 556 aaPredicted RBP11.17□□□□□ -0.62
STAMBP-201ENST00000339566 ZNF326Q5BKZ1 582 aaKnown RBP11.16□□□□□ -0.62
STAMBP-201ENST00000339566 DEKP35659 375 aaKnown RBP11.16□□□□□ -0.62
STAMBP-201ENST00000339566 ARXQ96QS3 562 aa11.1□□□□□ -0.63
STAMBP-201ENST00000339566 TONSLQ96HA7 1378 aa11.09□□□□□ -0.63
STAMBP-201ENST00000339566 NOP58Q9Y2X3 529 aaKnown RBP11.08□□□□□ -0.64
STAMBP-201ENST00000339566 MRS2Q9HD23 443 aa11.08□□□□□ -0.64
STAMBP-201ENST00000339566 NEFMP07197 916 aa11.07□□□□□ -0.64
STAMBP-201ENST00000339566 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
STAMBP-201ENST00000339566 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
STAMBP-201ENST00000339566 ZCCHC6Q5VYS8 1495 aaKnown RBP11.03□□□□□ -0.64
STAMBP-201ENST00000339566 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
STAMBP-201ENST00000339566 PPP4R2Q9NY27 417 aa11.02□□□□□ -0.65
STAMBP-201ENST00000339566 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
STAMBP-201ENST00000339566 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
STAMBP-201ENST00000339566 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
STAMBP-201ENST00000339566 P3H3Q8IVL6 736 aa11□□□□□ -0.65
STAMBP-201ENST00000339566 CEP162Q5TB80 1403 aa11□□□□□ -0.65
STAMBP-201ENST00000339566 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
STAMBP-201ENST00000339566 SENP3-EIF4A1A0A087X0R7 540 aa10.98□□□□□ -0.65
STAMBP-201ENST00000339566 ANP32BQ92688 251 aaKnown RBP10.97□□□□□ -0.65
STAMBP-201ENST00000339566 ERICH6BQ5W0A0 696 aa10.97□□□□□ -0.65
STAMBP-201ENST00000339566 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
STAMBP-201ENST00000339566 UPF2Q9HAU5 1272 aaKnown RBP10.94□□□□□ -0.66
STAMBP-201ENST00000339566 CLIP1P30622 1438 aa10.94□□□□□ -0.66
STAMBP-201ENST00000339566 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
STAMBP-201ENST00000339566 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
STAMBP-201ENST00000339566 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
STAMBP-201ENST00000339566 SIN3AQ96ST3 1273 aa10.89□□□□□ -0.67
STAMBP-201ENST00000339566 EIF4G2P78344 907 aaKnown RBP eCLIP10.88□□□□□ -0.67
STAMBP-201ENST00000339566 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 236.1 ms